Gene detail

Detailed information of ENSQPTP00000018375.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031556725.1, AP-3 complex subunit sigma-1-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2YDH6	AP-3 complex subunit sigma-1 OS=Bos taurus OX=9913 GN=AP3S1 PE=2 SV=1
Q92572	AP-3 complex subunit sigma-1 OS=Homo sapiens OX=9606 GN=AP3S1 PE=1 SV=1
Q9DCR2	AP-3 complex subunit sigma-1 OS=Mus musculus OX=10090 GN=Ap3s1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008683 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01217 all species →	Clat_adaptor_s	Clathrin adaptor complex small chain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011012 all species →	Homologous_superfamily	Longin-like domain superfamily	Interproscan
IPR022775 all species →	Domain	AP complex, mu/sigma subunit	Interproscan
IPR027155 all species →	Family	AP-3 complex subunit sigma	Interproscan
IPR000804 all species →	Conserved_site	Clathrin adaptor complex, small chain	Interproscan
IPR016635 all species →	Family	Adaptor protein complex, sigma subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11753 all species →	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006896 all species →	Biological Process	Golgi to vacuole transport	Interproscan
GO:0030123 all species →	Cellular Component	AP-3 adaptor complex	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan
GO:0015031 all species →	Biological Process	protein transport	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12399	AP3S; AP-3 complex subunit sigma	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.