Gene detail

Detailed information of ENSQPTP00000018540.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031558868.1, testin-like isoform X2 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000022773

gttttattttatcactTGAGTGGACCTATAGGAAACAGACCTACAGTCACCTAGTCATAACAATTCAATAGACTTATGAATCATTGAATAGCGCTTTCGATAACGTGTTGTTACGATATCGAGAATCTTGTCAAAGCCTGTTCAATTTTTGAAAGGGTCTGGCTAGAGTTGACATATTGTAATGGCTACGGAAACCTTAGTCGAAGCAAAGATAgtcaagaaaatccctaagaAGCCACCTCGGCCTAGCTTGATAGTAAAGACAAGGTTGGTACTGAATCAAATCGAGAATAAATCAAGAAAAAATTGCACTTATTGTAAATGTCCACGTGAAAATCATGACATCGAAACAAACGTCGATATTAGCTCAGGCGTCAATGGGATTCAGTTCAAGATCGGTGGACTCAAGCTAGATGACAATAATGGGTTCGGCTCTGATGAAGACTTgcctcccccaccccctcccctgaCGATCTATCAAGACGAAGGGGATGATTTCCCGGATGTACCGGCAATTGAAAATGATGCCCAGTCGAGTTTTCCTGCCCCGCCCATCATTACTAATGGCAataaatcgaccaaaacctaTTTGTGGGCTCCGCCTGGATTAAACTCTAGCCAGGTCGAAGAGTACTTCAAAGAGATCCCTTCAGAAAAAGTCCCAATTCCAGGAACTCCAGGAATGAAGTACTATGATGAGCAATGTACCTTTCAAAACCCACCCCAAGACAGGGCAAAGATGGCCAACGTGTCTCCAGAAAAACGAGATGGTATCGCGCAGTTCTGGAAAAAAGAGGAGCAGACTAAGGGTTATGGAGTCGTCAAGCTTCCCTTTGGAAGTAAAcagcgCTGTTTCCGCTGTAGCAGACCAATCCTACGCAGCGAGCCAGCAGTTATAGCCGAGGATATCGGCAAAGAAGCAGTCTATCACCCAGCATGCTTTTCGTGTGAGACATGTGACGAGTTGCTGGTGAATCTGATTTACTATCGAAGCGATGATGAAGTATACTGCGCCCGCCATCATGCTGAGCTTACGAAGCAGCGGTGTGGAGGATGCGACGAGTTGATATTCTCAGGTGAATATACGGTGGCCATGAACAGGAGCTGGCATTTGGGTCACTTTAGATGCCAGCGTTGTGATTCCAGTATAACAGGGAAGCAGTTTATCGTATTGAAGGACAAACCAGTATGTAACGACTGCTTCAAGGATTCCTATGCGCATGAGTGTCACGCATGTGGGCAGAAGATTGGTCCAGAAAGCCGTGATATCTCCTCTGATGACAAAAGGCACTGGCACGACTATTGCTTCAAGTGTGATCTCTGCCACCGGCCCCTCCAGTCAGACGGTAAGTTCACCTTCTACAAGGACAAGACGCTTTGTACAACATGCTACGCAACGAACTACCAAAAGGCTTGCAAAGCTTGCAACAAGCCAATCGACTCAGGCGGATCGCGGCTCGAATACAACGGCAACTACTTTCACGAGCACTGCTTCGTCTGTAAAATTTGCTCCAAGGAAATTGGAACCAGTGGCTTCGTGCCAAAAGATGATGAATTCTACTGCCCCTCGTGTTTTCAGAACGAATTTTCCAAGCGTTGCGCTGGCTGTGGAGAGCCGTTACTAGAAGGAGGCGTGCTGTACGGCGGTCAAACCTGGCACAAAACCTGTTTTACATGTCACTATTGCCACCGCTCCCTCGCTGCCAATGCGTTCTCTGTACGCGATGGATTTCGGTACTGTATGGAATGCTATGGTACTTTTTATGCCAAGCAGTGTGAAATTTGTATGAAGCCTATTGTCGGGGGTGAATATTACACCTTAGACGAGTCGAACTTCCACAAGGACTGTTTCATGTGTAGTCGATGCTCGCGGTCTCTCGCAAGTGAAGGATTCGTCCGTGAGGGAATGGAGCTACTCTGCGCCAACTGCGCCGATTAACGTCACGTTGCCATAGGAATGAACTTTACCATAgtaactaaataaataaaaatagcgTTACGAAGCAACTAGTGGAAAGTACGTACCGACGCTTTGGATTTAATGTTGTCTTggtaaagaaatgaaatggaCTTTACGGTAACTTAGCAACCAAACAGAAAATTTTAATGAACGTTACCACAGCGGCAAAATAGAATAACAGCGTTACTAAGCAACTAGTCAGGAAGATGCGTTCCGAGGCTTTGGGTTCAATGCTGTCTTTGTACCCAAAGTAAAAATTGACGTTACGATAACTTAGCAACGTTACGGTAACTTAGCAACGTTACGGTAACTTAGCAACCAAACAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q13643	Four and a half LIM domains protein 3 OS=Homo sapiens OX=9606 GN=FHL3 PE=1 SV=4
Q3ZBI6	Four and a half LIM domains protein 3 OS=Bos taurus OX=9913 GN=FHL3 PE=2 SV=1
Q9R059	Four and a half LIM domains protein 3 OS=Mus musculus OX=10090 GN=Fhl3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001134 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412 all species →	LIM	LIM domain	Domain	Interproscan
PF06297 all species →	PET	PET Domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781 all species →	Domain	Zinc finger, LIM-type	Interproscan
IPR010442 all species →	Domain	PET domain	Interproscan
IPR047120 all species →	Family	Prickle/Espinas/Testin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24211 all species →	LIM DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.