Gene detail

Detailed information of ENSQPTP00000018965.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031562033.1, NLR family CARD domain-containing protein 4-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000023302

ATGGACCCATACAGAGCTCGATTGCTGTCGATCTCAAACGATATCAcagaaaaagaatttaaagACTTAAAATTCCTCTGTAAAGGACATTTACCAAGTGGGATTTTAGAAAAAGCGAATCGTCCTGTCGAGTTGCTCGAACTCCTCGAGCAGAACGGCCTCCTTGGACCCAAGAACAACGAATACTTGGGCGCTTTACTTGATAAAATTAATCGTAATGACTTGACAGGAACTGACAAGACGACAGACAGGACCCTAGTAACAATACAGGATACTCTGCGAGACCACTACAAGAACGTGATTGGATGGCTGCAGCCACTTACATGGAATAGCACATTCAGAATTCACATCAAACAGATTTTCACTAATCTAGAGTTAATAAAACACAACCAACATGGGGCCCATGGCAATAGACAACCCATGTCCAGCTATGAAGACATGTTCCAACCCAAAATCAAAAGGATCCTAATTGAGGGTAAAGCAGGTGTTGGGAAGAGCACACTTGCCTCGGAAATGGTCTATGACTGGGCAACTCAAGTAAATAACTCTAGTTTCAAGTTGGTATTTCTGATTGAACTAAGACAGGTCAATAAGGGAATCAAGGAAGCTATGTTTGATCTGCTGTTCCCACGAGACTTTGAGGTTACCCCTGACCAACTGTACGATTATGTCACTCATCATCAGGATGAAGTTCTCTTTATCCTGGATGGGTATGATGAGATCAACCCATCTCTGATCCCTGACCTCCATGATCTTATAATGGgaaaatttttgaagaattcCACTGTAGTGGTGACTACAAGACCAGAAAAGGGCTCCAAATTACACTGGTATGTGGACATCAGGGTTGAGGTGACAGGCTTTACTGCAGAAAACATGTATCAGTTCATTCATAGATACTTCAAAGAAGATACAGTGAGTGCAGAATCCTTGATCAGTGACCTCGAGATGAACCCCGTTGCTGAGAATATCGCTCGGCTTCCTTTAACTGCCTTACTGATCTGTGCTATGTGGGAGGAGATGCCTCATGTCCAGGTGCTGTCAACAATGACTGGACTGTTTGTGGAGTTAACTCTGTGTTTAGTCAAGCGATATTATtccaaagaaaagaaggaaaatgaGTGCGACCCTGAAGATATCAGTACACTGGAAGACATCCCACCAAATCTCTACCAAAGCTTTCTCACCCTTGGGGAAATTGCCATCAATGGGCTGCTTGAAGACCAGGTTATTTTTGACCGCAAGTTACTGGAAGACAAGTGTGGTAGTCGGGAAATATTTGAGTTGGGTTTTTTAAGTCTGGAAAGAAGCGCTTCAAGGCTTCGACCAAAACAACTCTGTCGGTTCTTGCATCGTTCGTATCAAGAGTTCTTGGCTTCGTTGTGGTTGAGCGACCGAATCAAGAAATCGTTTTTTGACCCCATCATTTACGAGGAGACCGTGGTGCATGTCATGAAGTGTGTGACTGCTGAGTTGATGACAGTTCTGTTCTCATTCACTCCTGGTCTTTTGGGTAACGCCTTTGAGAAGTTTTTTGAGATTCTCATCTCTGAGGGCGGTCAGAATGCAATAGAGGAAGACATGAAACAGTTGTTCTTTTTAGTTTGTGTGCAAGCTTTATACGAATCACAGCAAGGTAGTCTCGCCCCCATGCTTGATCAGAGTGTAGTTAAAGGAACTATAAAGCTCAAGACAACGGAGCCAACTCCTTATGGAATACGCTCACTCGCATACTTCATGCAGAACAGTCTAGATGTTCACACTCTTATTTTTGAAGACAGCTTCCTGTCCAAAAGAAATCTAGCTACGCTTGCAAGAAGTTTGTTTGACataaaaaatcttaaacaACTTCATTTAATTAACAGCTTTGCCACTAGTGATGCCATGAAAGTGTTCACAGATAATCTCAGTGAAAGGCTTCCCCTGGAAAAACTACTCGTATCAAGATCTAAGCTGCTCGTCAAAGACCTTCCCGAGGTAGTGCACTGTTGCTCCAAGCTACACGACATTGAGATGAATTACAACGAGCTGTCGGAAGAGAATTTCGGGAGTTTGCTTCAGGCCTTGAAGGCTGTTCCATACCTGACAAGAATTTGTATATCTAGAGAAAAGATTTATCATGGGAATGTGCCATACTTGTGCTCCTTGTTGAGAGGTAATTCTCACCTCACTCATCTAGAACTGAACAAGTGCGTCTTCTACAGCATCGATGATGTTGTTTTAATCTTGAATTCTCTGCAACATGTTTTCAGTAAGTTGACTTGTTTGACTTTGAGTGGGGCGATAGTCGGAAACAAGCGCAAAGTCGACCTAGAAAGAGAGCCCATTTACAATGTCCTTGCAGAGGTACTACCAAGTTTTGAAAGTTTGACTCATCTGGATTTATCGAGAAACGAACTCACTAAATGGACTGATCTTCAACAGTGTCTAGGAGATTTAACACTGCTACGCTTCCTCAACATATCCGGTAACCGTATAGCAGACACCGGTGTGGCAAAACTTGCTAATGTCTTATGCAACCTCCGTCAGTTAGAGGAGTTGCACTTAGCTTGGAATGAGATCACTTGTGAAGGTGCAGTGTCGTTGGCGGCAAACCTTAAATTCTCGACAAACTTAACTGTCTTGTCACTGAAGTCCAACAAGATTTCTGATAAGGGAGCCAGTGAGGTGTTCGAAGCTCTGTCTAGCATTTCCTCCATCAGGgagattttattcgataacaaTTTGATATCAACAGTCGCCATCATCTCTCTGCTACAGCACTCGGTCAACATGAGGAACCTGGAGTGTCTCAACTTCAAGCAAAACCTGTTGGACGAGTTAGGAGTTTTGACGCTGGTTGAAACTTTGGGTTCCTTGCCGAAGCTCAAACAGATTCTGATTGGGTGTCCTGTAGTTCGCAATGACTCAGTGAATGAGGATGAAGCAATGGCTTCTGCATCTCGAGTAGAAAACCCACCAGCTACTAATCTGGAAGCAGAATCGCCAGGTTTCTTTAcggaaaacaagaaagaacCTCATGGGGCGCACGACATGTACTGCTACAAAACACTATCGAGTGACGTGTTTCTCTTACCCACATATACTATCGAATGA

Transcript

ENSQPTT00000023302

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86W25	NACHT, LRR and PYD domains-containing protein 13 OS=Homo sapiens OX=9606 GN=NLRP13 PE=1 SV=2
Q86W24	NACHT, LRR and PYD domains-containing protein 14 OS=Homo sapiens OX=9606 GN=NLRP14 PE=1 SV=1
Q86W28	NACHT, LRR and PYD domains-containing protein 8 OS=Homo sapiens OX=9606 GN=NLRP8 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan
PF01335 all species →	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR001875 all species →	Domain	Death effector domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46312 all species →	NACHT DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000018965.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.