Gene detail

Detailed information of ENSQPTP00000018974.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552167.1, ADP-ribosylation factor GTPase-activating protein 3-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000023313

GATGAGGTGCTGGCAGTTTTCTCAACAAGCTCGTTTCTTCTATAAACAGCACGTCCAATAACATAGCCAACAGCAATCGAAACACCAACAAGTAGTATCACAACGATTGCGATTGCAAAAAGGCTGCGAGACTTCCGGTGAAGAATACGAACACGTGACCTGGCTAATGGTGACGTATATCCAAAGTTCGTGTATCCAAAGTTCGTGTggcaaaaagaaattaaaatggCGGATGGTACAGCGAACCCCAAAGATATAACTGCTATATTTAAGCGGTTGAAACAACATCGAGATAACAAGATGTGTTTCGACTGTGGTCACAATAATCCAACGTGGGCTTCTATAACTTATGGTGTCTTTCTGTGTATTGATTGCTCTGCTGTTCATCGGGGTTTAGGGGTTCATTTGTCTTTTATACGATCTACTCAGTTAGATACGAACTGGACTTGGTATCAACTACGAGCAATGCAAGTCGGAGGAAACGCTAAAGCTACTGCATTTTTCAGGCAACATAGTGTAAATACTGAAGATTCTACTGCCAAGTACAAAAGCCGAGTTGCCTTACTCTACAGAGAAAAAATTGCATCACTTGCCGCCAAAGCACAAAACATGTATGGAACACAGCTTTTCATTGATACACCTCACGCTCCAGCCACACCAAACTCACCAGATAAAGATAAAGACTTCTTCACTGAAATGGAGAGTGCTACCCCTAATGCCATCACAATCCCTAATAATGGAAGCAATGGAAGAAACAGCCCAgCTAATGGCGCagccaaagagaacaagaACATGGATCTTGACATCAATGCTCTTAGTATATCCCCACCAAAGAAATCAGAGGCAAGAGTACCCACCATAGGAACAAGAAAGCCAACTGCCAACAAGAAGAAGGGACTTGGAGCTAAAAAAGGAGGACTCGGAGCTACGAGAGTTAAGGCTGACTTCAATGACATAGAAACAAAAgctcaagaaaatgacaaaaacAGAGAGAAAATTGTAGAACAGAAATCCATTGAGGCAAaggaagaatttttttctccgAACCTGACTTACAATCCAGTTGacttgaagaaagaagaagaaaaactaaaGCATTCAGACCCCAAGAAAGCCACACAGTTAGAACGACTTGGAATGGGTTTTGGACCACGAGCTGGACCAAAATCACAGAGTACTGGTAGAAGCCATTCTGCTGCTGCAAGCATGACGGTTGTTGAACAAGTTAAGCCTGAGAAAGGCAGCTCTTCTAGCAAGGGTTTTTATGGCATGTCATCTCAAACTGGATTCTTTGACAGCTACTTGGATGAACCTAGTGTAACTGAACCTCCACCAAGtTACAGTCCATTCAGTAACAATGATAACAGTTGGGATGTCATTAGTAGGGAGGAAGTCAGGTCCAATTCTTCCTATCCTAAAAGCTTCTCCAGAGAGGACAGCCGATCAAGAGCCAAACATGTACCAGAGCCTTCTTCATCTTCCTCAGATGAGGTCATGAAAAAGTTTGGAAGTGCAAAGGCGATTTCGTCCTCACAgttacatggtgatgatgacagggaAGCTTACGGAGCAAAATCAAGACTGGAACGAATGGGTCATTCTTCAGGGATTTCCAGCGCTGATCTGTTTGAAGATGAGAGCTCCCAAAAACgGTTTTCAGGACGCACAGGGTCTGctaattattcaaatattaaaGATGAAGTTGCTAGAGTTACTGGAAGGTTATCTTCTATGGCATCAGATGTTATAGGATCTATACAGACAAGATACAGTGGCTCAAGCTAAATTCCATTATTACTGACTGTATAGTTCACAAATTATTGTTAAATCAATCCATCACATCCTTGAATACAGAAAAAATTAATGccatttttattcaaacaaaGTCTAGATTTATTTTGGGTCTTAACTTAGACTGATTATTGACCTGTATGACCTGTACAGGGCTTAAAATTAGGGCAGGACATCCAACAATGTCCACCCCAGACTTGGAACTTGTCTGGTGGGTAAATCTTTCCCTTAAAATTGAGCAAGAAATGAGGTATGACCGAGCTAAAACCAATTTGGCCGGTCATCATGACCTGAGACTTCTCAACCAAccttattttaagccctgctgTGGACAGAAACCACCTCAAACAAAACTATAGCTTCTCTACCCTGGTGCAAGAGGGTTTTTTAACAGTGCTAGGTACATGCTAATCAAAATGAAAGTCGCAACAAGTTAATTGACAGTAAACTACTGTCAATCAATTAGATCATTTGATCTAGCTAGAGTATGACTCGCAGGTAGCTTTATGTACCATCACtattatttgattgacagtggTCTACTGACAATTGATCTGTCACCACTTTTGTGTCAGTCAGCTTGTAACAATGAAAACCATGGTTAAAGTTGGAACAATAATATGTAAAACCCTCTCAAACTAGGGTGCATCATCTTTGACCTTGAACCAATCTGTTATCATTATGATTATAATCTTTGTTATAATTATTCTCTGTATACTAAATAGTAAATTGTCaccaaaatgtcaaaaattaTTTGCTGCAACATCTACTCCTAGCAGGAAAAGCTTAGCCTtctttgcagccgttcttagtgtCCTCACGCAACGTTTGGAGGGAAACGTTGGGTGACggaccctaagaacggctgcaagGGAGGCTGGGAAAAGCTGTGCTCTGGGTATTTTCATACTTTTCTGCTAGAACACAAAATCCGATGCATTACCAACAAGTAACTTCTTACAAAATTCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R787	ADP-ribosylation factor GTPase-activating protein 3 OS=Pongo abelii OX=9601 GN=ARFGAP3 PE=2 SV=1
Q28CM8	ADP-ribosylation factor GTPase-activating protein 2 OS=Xenopus tropicalis OX=8364 GN=arfgap2 PE=2 SV=1
Q4R4C9	ADP-ribosylation factor GTPase-activating protein 3 OS=Macaca fascicularis OX=9541 GN=ARFGAP3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006837 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01412 all species →	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001164 all species →	Domain	Arf GTPase activating protein	Interproscan
IPR037278 all species →	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR038508 all species →	Homologous_superfamily	ArfGAP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45686 all species →	ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0048205 all species →	Biological Process	COPI coating of Golgi vesicle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12493	ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.