Gene detail

Detailed information of ENSQPTP00000019706.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031570356.1, GTPase Obg-like isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000024177

CTCATCCATAGTATCCTAATCATaagatcatcatcatatcattgATATTTATTACCTATAGATGATGACACAATTCAAAGTCATCAGTTTAATAATggtttaagaaatattttactatcCAAACCAAATATGAAATTGTACCACAGGACACTAACATATTCTGTATGGAGGCATTACTGCTCAACTCAAAagGATCGGCAGTTTATAGACTGGAAGAAGATTGTGATTAAGGCTGGTAATGGTGGGGATGGAAGTGCCCATTTCAGACGAAAAAAACGTCAGCCAAGAGCAGGTcctgatggtggtgatggtggacACGGAGGAAGTGTCCTCCTTGTTGCAGATGCTTCATACAAAGAATTAGTGCATGTTAAGAAACACAACAAGGCAGGAGACGGAGAAGGtggtaaacaaaatgactgtcatggaagaactgcatcagatttatttattaaaGTGCCTCTTGGGACTGTTGCAACTCACTACAAAACCATCATAGCAGACATGTGTACAGAGGGTCAACACACAGTCATTGCtcatggggggaggggagggttgGGAAATGCTCATTTTAAGTCAGCAACTAACCAATCACCTGAGATCGCCACTCCTGGCACTCTTGGCGAAGAGAAAGTAATTGAGCTGGAGTTAAAGACGATAGCTGATGTAGGATTGGTTGGTTTCCCGAATGCTGGTAAATCTACATTATTGAGGGCTATTTCCAAAGCAAAACCAGCTGTCGCGGCATATCCCTTTACAACACTCAATCCATATGTTGGAATGATAGAGTACGATGATTACCATCAAATTGCAGttGCAGATATACCTGGGCTAATTTCAGGTGCTCATCTCAACAAAGGTCTTGGACATTCCTTTTTACGGCACATAGAGCGTTGTCGATGCCTTCTCTATGTCCTGGACATCTCACAGAACGATCCACTGAAACAATTCTCTTCATTACAGCAAGAATTAGAACTTTATAAAGAAGGTTTGTCACGAAGACCTGCTGCAGTTGTGGCAAACAAAATAGATACAGTGGAGAACTTTAAGAGCAAAAATCTGGTTGAGGAACTTGATTTACCTGTTATACCGGTTTCAGCTCTTTTTGGACAAGGAATCGGGGTTTTAAAGACTAAGATAAGATTACTATTTCAAACATCACTGAATAGGGTTTGAATCATTACAACGCTTGATTCCTGGACGTGCCGTTACTTGTGATTAGCCATAATAATTTGTTAGATCTCTTGatttttccgggttctctaGTTTTTTTCCTCCCTTCGGAATAACTTACAATGACCTAACAAGCGGATTCAAATTCCAACTGGGAGTAAGCCTttccctgacttacatcagtcCTTAAATTGTTTCGGGGTTCTATCCTCGTCAAAGTCAGTCCCACGTATTTTGCATGCTGTCTTGAACTTGTGGGAGcttttttttctcaaccttTGAACGGCTAATATAGCGCACTTTTCCATGTGGATATACTTTAAAAAGCGCTTTAAAATGAGTCCGTCCGTCAGTCGGTCCGTCCGTCAGTcggtccgtccgtccgtcagtcggtccgtccgtccgtcagtcaataaacaaaccaaaaaataaataataacaatattacATATAGCCAACTTATAATAGCCAGTTTAATTACTTTCAAATTAATATAGTTATTTTTATCTCTATTTCAGTTCGAACCAGTTTCATAATCGTGTTGTGATAAAAAATTCAATCGCCAATAAATCTACGGCAATACAATTTGAGCTGCGCTCGAATGGTGTATTTTTCTCGACTATTGATTAAAGCTATCCTCAACCTGTGGTCGTTGTCTACAACTAGTCATTTTTTTCGTGACTTTTTAAGTCCTGCATTTTTCATGATAAATTTCTTTCCAAATTCTTagaacaaaaatatttgattaaaATCATTTGCAATGTTCAAACTgagatttcattattttcaaagtgTCTGGATTGCTCATGACCTCAATAGCAGTCATTGCCATCGCCTTTGCAGCAATGATAGTTTTGTGATGAGCAGCATCAGTAGCTGCGGCTGCAGTGAAGGCATGAGAATGATTGGGTGCGGTTGTATCGATACTGTACAAGGGGTGAATCGAAGGAACTGTATAAGATACATTTCCCATGTCAGTGGAACCCAATGGCAACTTGTTCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RDW1	Mitochondrial ribosome-associated GTPase 2 OS=Pongo abelii OX=9601 GN=MTG2 PE=2 SV=1
Q9H4K7	Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens OX=9606 GN=MTG2 PE=1 SV=1
C0QUB5	GTPase Obg OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=obg PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001371 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF01018 all species →	GTP1_OBG	GTP1/OBG	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031167 all species →	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR014100 all species →	Family	GTP-binding protein Obg/CgtA	Interproscan
IPR036726 all species →	Homologous_superfamily	GTP1/OBG domain superfamily	Interproscan
IPR006169 all species →	Domain	GTP1/OBG domain	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR045086 all species →	Family	OBG-type GTPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11702 all species →	DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03979	obgE, cgtA, MTG2; GTPase	EC:3.6.5.-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.