Gene detail

Detailed information of ENSQPTP00000020012.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: XP_020901122.1, torsin-1A [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQPTT00000024526

TGAATTAGAAGTTTGATAAACAAGCTAGCTTGGCTGGGTTAAAACTGTTGCGCCATGGCGAACTTcttgttatattttatttattttcttgttctcACTGGAATAGATAATGCCAATTCTATCGACTCGTAGAAAACTGAGTTTTTCTTGGAAAGATCGGAAGACGCCACGCTTCACGTCATTCATATTGAAAAGCTGCCCCCACTTGAGTAACTTTTTGATCGGCCAAAACTTCTTTAGTCCTCGAAGACCTGAAGTTTGATAAACAAGCTCGTAGCTCGCTTGGTGAAAACTGTACGATGGCGAATTTcttgttatattttatttctcttcTCCTTGTCATCAGGATTACAAATGGCCAAATCAACGAAGCAGGCCTAGTTGGGATAGGAGCTGTGATAGGAGTTGCAATTCACTATGTTATGAATTCAAAAGGGAACGTGGAGCACTGTAATCCTGATTGGGTCTCTCTCAACgaaacaaagcttttttacgACTTGAATCGACGCTTGTACGGTCAGCACTTGGcttcaaacataatcttcAATGCAATCAAGGGACACCTAGATAATAAGACACCTGAAAAAGCCCTGGTATTGTCCTTGAACGGTATGACGGGATCAGGCAAGAACTATGCCAGCCGAATCATTGTCGAGAGTATATACGAATTAGGATTATCCAGCCAGTATGTGAAGGTGATTATTGGCAGCCATGACTTCAAACATGGGAATGAACTAGAGTGGGacaaaatgaaactaaaaaactGGATTACTGAAATTGTTTCCAAGTGCCCAATGTCTTTGTTTATATTTGACGAAGTGGAGAAAATAAGCCCAGAGCTTATCGATGTTCTCAAGCCATTTTTGAGCCATTATCCTAAAGTCAATGGAGTCGACTACAGAAAAAGTATTTTCATCTTCATTGCGAATACTGGTGCTGATCTCATCaacaaagaaacaatattCTACTTTCAAAACCGAAAGAGGAGAGAAGATATTACGATCAAACAAATGGATAAAGTCTTAAGCAAAGATGCTCTGAATGAAGTAGGTGGTTTTCTACACTCTACCCTGCTTGACCACCAGCTCGTCGACTACTTCGTTCCATTCCTTCCCCTGGAGAAACATCACGTATTGAAATGTATCGAAGACGACCTCAGGGAGAAGAATCTTCCAGTAAATGATATTATAGTTCAAAAAGTTTTGAGTGAATTGCTGTATTTTCCAGGAGACAGCCAGTGGTTCTCGGAATCTGGATGTAAAAAGGTTTCCAGTAAGGTGGATCAGTATATCGAGTAACTTTTTAGCTAAATGGGGAACAATAGCTGGAACACTAGTTTAGCGATACTTCATGCTTACTAGCAAAACCATTCAACAATTTTCACAAAAACTTGTCACTGATAATTTTCTTCGTGGCACATTCAGCAAAGTTAATCTCCGGCACATGAATAACAGAAGGATAATAAGTAGGGTATAAGATCGTCAAAGACTGATACAAGCCAAAAAAACTCACTCGACTTTCAAGTTCTTTTTGAGagtctaaaaaaaattaaaaaacaactgCAAAAAGGAATTAAAGTGAGATTTGCCACActcaattatttttgaaacgatgagattttattgaaaaattttaCTGATCAAAGCTACTAACTTCCAAGAAACGTCGAACTTGAATAGTAATGTATTTTAGGTAATTAACATCTAATTGTCAAATATTGCACAACTTCGACAatacaaacttttaaaattccACAAACTTTCACTAAATATTGAATGTACTCTCATAcgaaatcgaggctaacctaGAACTGAACAGAGAATTCGAAACTgtagtatatataatattgCACTAAATGTCTTAAAAAACTGACTAAATGATACTTTATTTTGCATTCCTTTCAAACTAGTTATAAAATCTTCAAGTTTTTAAcgaattaaaattattttcaaactttATTCCCATTTGAAACCATTTGTCATTCCCTTCTGAG

Protein

Uniprot

Uniprot term	Description
Q60HG2	Torsin-1A OS=Macaca fascicularis OX=9541 GN=TOR1A PE=2 SV=1
Q9ER39	Torsin-1A OS=Mus musculus OX=10090 GN=Tor1a PE=1 SV=1
O14657	Torsin-1B OS=Homo sapiens OX=9606 GN=TOR1B PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06309	Torsin	Torsin	Family	Interproscan
PF21376	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR010448	Family	Torsin	Interproscan
IPR001270	Family	ClpA/B family	Interproscan
IPR049337	Domain	Torsin-1A, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10760	TORSIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22990	TOR1; torsin-1	-	Membrane trafficking	ko04131	deepkoala