Gene detail

Detailed information of ENSQPTP00000020527.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031566159.1, tripartite motif-containing protein 3-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000025133

ATGGAATCTTTCCTTGAAGATCTGAAGAAGCACGTCCAGTGTTCTTTGTGTAATGATACTTTAACTGAACCGAAGATCCTTCCATGTTTCCATACATTTTGTAAGCCTTGCGTCGGAAGACACGCCGAGCTCATCGACCAAGTCAACGTCTTCAAGTGTCCTCGATGCAAATCACAAACTCCTCTACCAGAACCAAGCAGCGTGGAAGACCTCCAGCCAAGTTCACTGCATTCAAGAATCTTGAAGGGTCTGGCGTTGGCAAAGGGAGAAAAGGTTTGCTCTGTTTCTGAGAATCATTCTCCAGCATCTTGGTATTGTTTTGAATGCGATCATTCACTGTGTCAAGAATGCAAGAAGAGCCATTCTTACTTCATCAAAGATCACAAGGTCGTTTGTCTGGCTgatttgaagaaagaagatatTGATTTCATAATAACAAGAGAAAATCCTTGTAAAAGTCACCCTCAGCACAGGCTAGAGTCATTCTGTGAAGACTGCGATGACATGATTTGTGTGACATGCTGGAAACACAATCACAAGGATCATAAGACGATGTCATTAGATAAGTTTGCTTCGATCAAGAAAGATGCATTGTCAAAGCATCTGCAAGTACTAGAGCAGTTGAAATTAGATGAAAAGgaacaacagcaacaagaaAAAATCGCTAAAACTATCAAACAACAAGGAGAAAAAGCAAGACATGAAGTGAAAGAAAAGACCAAGAAAATGATCCAAATTCTACAAGAAAATGAACGAGAACTACTGAGACAAATAGACGAGAAGTTCGACACAGCCTCAACAAACTTGAATATAATTCCCCATATTCCAGCAGTCGAGGAATACATTAAGAATATGATGGAAAAAGGACTGGCAAGTGAAATGATCAACATTCAAGGGAAACAGTGCTCGGAGAAATTCATCTTCAACCCAATTCCACTCTCATCAAGAATTGTCTTTATTCCTAACCAAGAGCTGGTGCAACAAATAGAAAAAGGTCTAGGAGAAATACAGACGCATTCTGAAACAGATGACGATGACGTGGAAATAGAAGGAAAAGTAGAAGTAGATAGTCAACTGACAGCAGAGGTTCAAGTGAATGAGAATCATGTATCTAATGGGATGCCTCAACAGATGAGAGTAACAGAAAGGTTTCAAATGAAAGGTGTGCCTGATACTCACAGTTTAACAGGCATGATAGCAGTGAACAGAGACAACAGCAGGCTCGCTATAGGCAGTGAAGAGGAACATTGTCATTTTCATGGTCCCGAAAATTTAGCATTCCTGAATGATACAGATTTAGTCATAGCAGACTGGGGAAATCATAGAATAGGTGTAGTCAACACTTTAACAGGGAATTTGATCAAAACTTTCGGTAACGAACGTAGCGTATTTTACGAGTATTTTTATCCAAATGGAGTACACGTTGATGACGATAACATCATTGTGTGTGATCGTGATAATCATCTTGTTGAAGTCTTCACAAGAGACTGTGACTATCAACATGAGTTTGGTTTGACAAGAAAGGACAACTTTGATCCGATTGACGTGATAACGCATGATGGACTGTTTTACGTCAGTGATCATTATAATCATGTTATTCATGTATTTGAGAAGAAAGGTAAAGTGCTGACTAGAATATCAACGATTGGTGGATACGGCAGTGATGATGGTCAGCTGAGTACACCATGGGGCCTGGCTATTGATAATGACCATCATCTACTCGTGTGTGATGCTGGTAATAATCGTGTCCAGAAATTCACCCTGGATGGTCATTTTGCTGGCAAGACAGTGGATGAAATCAAGTATCCTGTATCTATGGCAGTGTTGAATGATGGTCAGATATTGGTCTGTACGCCTTTTGGTGTATGGTTTTTTCAAAAAACTAAAGCAGTCCCGACGTTTCGATCTATGAATCGATCCTCTTCaggggaaagaaaagaaattatgCCAAGTACTGAGCGACTTAATTTGCATCAgtgtccttttttttctttctgtcttgAATTAcgattccttccttcctccctccctacctccctcccttcctccctccctccctccctccctccctccttccttccttccttccttccttccttccttccttccttccttccattctcttcctctttttttcttcctttctttctgtttcttgataaattttcattcatttttcctcACAGTTTGCCTTCCTCAAAATCGACCTTGATCGTTGGGAATGGTCCACGTCAGAAGACGAAGAGGACACAGCAAAGGATGACCAAAACCCAGAAGCACCAAAAACACCAAACCAAGACAAGAAAAGCCACAAACAAGCCATTGTACCCGAGATGGACACCAGTGATTCAAGTAATAACTCCCTTAATAAACATGGAATCTTTCCTGGAAGATCTGAAGAAGCACGTCCAATGCTCCTTGTGTAATGATACACTTACAGAACCGAAGATTCTTCCATGTTTCCATACATTTTGTAAGCCTTGCGTCGGAAGACACGCCGAGCTCATCGACCAAGTCAACGTCTTCAAGTGTCCTCGATGCAAATCACAAATTCATCTTCCAGAACCAAACAGCGTGGAAGATCTACAGCCAAGTTCACTGCATTCAAGAATCTTGAAGGGTCTGGCGTTGGCAAAGGGAGAAAAGGTTTGCTCTGTTTCTGAGAGTCATTCTCCAGCATCTTGGTATTGTTTTGAATGCGATCATTCACTGTGTCAAGAATGCAAGAAGAACCATTCTTACTTCATCAAAGATCACAAGGTCGTTTGCCTGGCTgatttgaagaaagaagatatTGAGTTCATAACAACAAGAGAAAATCCTTGTAAAAGTCACCCTCAGCACAGGCTAGAGTTGTTCTGTGAAGACTGTGATGACATGATTTGTGTGACATGCTGGAAACACGATCACAAGGATCATAAGACGATGTCATTAGATAAGTTTGCTTCGATCAAGAAAGATGTATTGTCAAAGCATCTGCAAGTACTAGAGCAGTTGAAATTAGATGAAAAGGAACTACAGCAACAAGAAAAAATCGCTAAAACTATCAAACAACAAGGAGAAAAAGCAAGACATGAAGTGAAGGAAAAGACCAAGGAAATGATCCAAATTCTACAAGAAAATGAACGAGAACTACTCAGACAAATAGACGAGAAGTTCGGCACAGCCACAACAAACTTGAATATAATTCCCCATATTCCAGCAGTCGAGGAATACATCAGGAATATGATGGAAAAAGGACTGGCAAGTGAAATGATGAAGATTCAAGAGACACAGTGCTCGGAGAAATTCATCTTCAACCCAATTCCACTGTCATCAAGAATTGTCTTTATTCCTAACCAAGAGCTGGTGCAACAAGTAAATACAGGTCTTGGAGAAATACAGACGCATTCTGAAACAGATGACGATGACGTGGAAATAGAAGGAAAAGTAGAAGTAGATAGTCAACTGACAGCAGAGGTTCAAGTGAATGAGAATCATTTATCTAATGTGAAGCCTCAACAGATGAGAGTAACAGAAAGGTTTCAAATGAAAGATAAGTCGACGTATGCTTACAATCGTTTAACAGGTATGATAGCAGTGAACAGGGACAACAGCAGGCTCGCTATAGGAGTTACCAATGACCCTTCAAGATCTTATTGCAAAGTCCACATATTTAAGACTAATGGAGATCTCTTAATGACTTGTGATTATAAAGATAGTGTGCGGGATCATTCTCATGGTCCCGACAGTTTAGCATTCCTGAATGATACAGATTTAGTCATAGCAGACAAAGTTAATCGAAGAATATGTATAGTTAACACTATAACAGGGAATTTGTTCAAAACTTTCAGTAACCAAGGTGCCATACATAACGAGTTTTCTTATCCATATGGAGTACACGTTGATGACGATAGTAACATCATTGTGTGTGATCGTGACAATCATCGTGTTCGTGTCTTCACAAGAGATGGTGATTATAAATATCAGTTTGGTTTGACAAGAAAGGACAACTTTGATCCGGTTGACGTGATAACACATGATGGACGGTTTTACGTCAGTGATCATTATAATCATGTTATTCATGTATTTGAGAAGAAAGGTAAAGTACTGACTAGAATATCAACGATTGGTGGATACGGCAGTGATGATGGTCAGCTGAGTAGACCATCGAGCCTGGCTATTGATAATGACCATCATCTACTCGTGTGTGATTGTGGTAATAATCGTGTCCAGAAATTCACCCTGGATGGTCAATTTGCTGGCAAGACAGTGGATAAAATCAGTTATCCTATATCTATGGCAGTGTTGAATGATGGTCAGATATTAGTCGGCACGATTAGTTCTGGTGTGCAGTTTGTCAAGTAG

Transcript

ENSQPTT00000025133

GTTAATAAGAGAATTTATCTGATTTTACAACTATTTTTGAAACATCTGTCTTTAGACAACTCCCTCAAGCTAACCATGGAATCTTTCCTTGAAGATCTGAAGAAGCACGTCCAGTGTTCTTTGTGTAATGATACTTTAACTGAACCGAAGATCCTTCCATGTTTCCATACATTTTGTAAGCCTTGCGTCGGAAGACACGCCGAGCTCATCGACCAAGTCAACGTCTTCAAGTGTCCTCGATGCAAATCACAAACTCCTCTACCAGAACCAAGCAGCGTGGAAGACCTCCAGCCAAGTTCACTGCATTCAAGAATCTTGAAGGGTCTGGCGTTGGCAAAGGGAGAAAAGGTTTGCTCTGTTTCTGAGAATCATTCTCCAGCATCTTGGTATTGTTTTGAATGCGATCATTCACTGTGTCAAGAATGCAAGAAGAGCCATTCTTACTTCATCAAAGATCACAAGGTCGTTTGTCTGGCTgatttgaagaaagaagatatTGATTTCATAATAACAAGAGAAAATCCTTGTAAAAGTCACCCTCAGCACAGGCTAGAGTCATTCTGTGAAGACTGCGATGACATGATTTGTGTGACATGCTGGAAACACAATCACAAGGATCATAAGACGATGTCATTAGATAAGTTTGCTTCGATCAAGAAAGATGCATTGTCAAAGCATCTGCAAGTACTAGAGCAGTTGAAATTAGATGAAAAGgaacaacagcaacaagaaAAAATCGCTAAAACTATCAAACAACAAGGAGAAAAAGCAAGACATGAAGTGAAAGAAAAGACCAAGAAAATGATCCAAATTCTACAAGAAAATGAACGAGAACTACTGAGACAAATAGACGAGAAGTTCGACACAGCCTCAACAAACTTGAATATAATTCCCCATATTCCAGCAGTCGAGGAATACATTAAGAATATGATGGAAAAAGGACTGGCAAGTGAAATGATCAACATTCAAGGGAAACAGTGCTCGGAGAAATTCATCTTCAACCCAATTCCACTCTCATCAAGAATTGTCTTTATTCCTAACCAAGAGCTGGTGCAACAAATAGAAAAAGGTCTAGGAGAAATACAGACGCATTCTGAAACAGATGACGATGACGTGGAAATAGAAGGAAAAGTAGAAGTAGATAGTCAACTGACAGCAGAGGTTCAAGTGAATGAGAATCATGTATCTAATGGGATGCCTCAACAGATGAGAGTAACAGAAAGGTTTCAAATGAAAGGTGTGCCTGATACTCACAGTTTAACAGGCATGATAGCAGTGAACAGAGACAACAGCAGGCTCGCTATAGGCAGTGAAGAGGAACATTGTCATTTTCATGGTCCCGAAAATTTAGCATTCCTGAATGATACAGATTTAGTCATAGCAGACTGGGGAAATCATAGAATAGGTGTAGTCAACACTTTAACAGGGAATTTGATCAAAACTTTCGGTAACGAACGTAGCGTATTTTACGAGTATTTTTATCCAAATGGAGTACACGTTGATGACGATAACATCATTGTGTGTGATCGTGATAATCATCTTGTTGAAGTCTTCACAAGAGACTGTGACTATCAACATGAGTTTGGTTTGACAAGAAAGGACAACTTTGATCCGATTGACGTGATAACGCATGATGGACTGTTTTACGTCAGTGATCATTATAATCATGTTATTCATGTATTTGAGAAGAAAGGTAAAGTGCTGACTAGAATATCAACGATTGGTGGATACGGCAGTGATGATGGTCAGCTGAGTACACCATGGGGCCTGGCTATTGATAATGACCATCATCTACTCGTGTGTGATGCTGGTAATAATCGTGTCCAGAAATTCACCCTGGATGGTCATTTTGCTGGCAAGACAGTGGATGAAATCAAGTATCCTGTATCTATGGCAGTGTTGAATGATGGTCAGATATTGGTCTGTACGCCTTTTGGTGTATGGTTTTTTCAAAAAACTAAAGCAGTCCCGACGTTTCGATCTATGAATCGATCCTCTTCaggggaaagaaaagaaattatgCCAAGTACTGAGCGACTTAATTTGCATCAgtgtccttttttttctttctgtcttgAATTAcgattccttccttcctccctccctacctccctcccttcctccctccctccctccctccctccctccttccttccttccttccttccttccttccttccttccttccttccattctcttcctctttttttcttcctttctttctgtttcttgataaattttcattcatttttcctcACAGTTTGCCTTCCTCAAAATCGACCTTGATCGTTGGGAATGGTCCACGTCAGAAGACGAAGAGGACACAGCAAAGGATGACCAAAACCCAGAAGCACCAAAAACACCAAACCAAGACAAGAAAAGCCACAAACAAGCCATTGTACCCGAGATGGACACCAGTGATTCAAGTAATAACTCCCTTAATAAACATGGAATCTTTCCTGGAAGATCTGAAGAAGCACGTCCAATGCTCCTTGTGTAATGATACACTTACAGAACCGAAGATTCTTCCATGTTTCCATACATTTTGTAAGCCTTGCGTCGGAAGACACGCCGAGCTCATCGACCAAGTCAACGTCTTCAAGTGTCCTCGATGCAAATCACAAATTCATCTTCCAGAACCAAACAGCGTGGAAGATCTACAGCCAAGTTCACTGCATTCAAGAATCTTGAAGGGTCTGGCGTTGGCAAAGGGAGAAAAGGTTTGCTCTGTTTCTGAGAGTCATTCTCCAGCATCTTGGTATTGTTTTGAATGCGATCATTCACTGTGTCAAGAATGCAAGAAGAACCATTCTTACTTCATCAAAGATCACAAGGTCGTTTGCCTGGCTgatttgaagaaagaagatatTGAGTTCATAACAACAAGAGAAAATCCTTGTAAAAGTCACCCTCAGCACAGGCTAGAGTTGTTCTGTGAAGACTGTGATGACATGATTTGTGTGACATGCTGGAAACACGATCACAAGGATCATAAGACGATGTCATTAGATAAGTTTGCTTCGATCAAGAAAGATGTATTGTCAAAGCATCTGCAAGTACTAGAGCAGTTGAAATTAGATGAAAAGGAACTACAGCAACAAGAAAAAATCGCTAAAACTATCAAACAACAAGGAGAAAAAGCAAGACATGAAGTGAAGGAAAAGACCAAGGAAATGATCCAAATTCTACAAGAAAATGAACGAGAACTACTCAGACAAATAGACGAGAAGTTCGGCACAGCCACAACAAACTTGAATATAATTCCCCATATTCCAGCAGTCGAGGAATACATCAGGAATATGATGGAAAAAGGACTGGCAAGTGAAATGATGAAGATTCAAGAGACACAGTGCTCGGAGAAATTCATCTTCAACCCAATTCCACTGTCATCAAGAATTGTCTTTATTCCTAACCAAGAGCTGGTGCAACAAGTAAATACAGGTCTTGGAGAAATACAGACGCATTCTGAAACAGATGACGATGACGTGGAAATAGAAGGAAAAGTAGAAGTAGATAGTCAACTGACAGCAGAGGTTCAAGTGAATGAGAATCATTTATCTAATGTGAAGCCTCAACAGATGAGAGTAACAGAAAGGTTTCAAATGAAAGATAAGTCGACGTATGCTTACAATCGTTTAACAGGTATGATAGCAGTGAACAGGGACAACAGCAGGCTCGCTATAGGAGTTACCAATGACCCTTCAAGATCTTATTGCAAAGTCCACATATTTAAGACTAATGGAGATCTCTTAATGACTTGTGATTATAAAGATAGTGTGCGGGATCATTCTCATGGTCCCGACAGTTTAGCATTCCTGAATGATACAGATTTAGTCATAGCAGACAAAGTTAATCGAAGAATATGTATAGTTAACACTATAACAGGGAATTTGTTCAAAACTTTCAGTAACCAAGGTGCCATACATAACGAGTTTTCTTATCCATATGGAGTACACGTTGATGACGATAGTAACATCATTGTGTGTGATCGTGACAATCATCGTGTTCGTGTCTTCACAAGAGATGGTGATTATAAATATCAGTTTGGTTTGACAAGAAAGGACAACTTTGATCCGGTTGACGTGATAACACATGATGGACGGTTTTACGTCAGTGATCATTATAATCATGTTATTCATGTATTTGAGAAGAAAGGTAAAGTACTGACTAGAATATCAACGATTGGTGGATACGGCAGTGATGATGGTCAGCTGAGTAGACCATCGAGCCTGGCTATTGATAATGACCATCATCTACTCGTGTGTGATTGTGGTAATAATCGTGTCCAGAAATTCACCCTGGATGGTCAATTTGCTGGCAAGACAGTGGATAAAATCAGTTATCCTATATCTATGGCAGTGTTGAATGATGGTCAGATATTAGTCGGCACGATTAGTTCTGGTGTGCAGTTTGTCAAGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q56R14	E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Q03601	RING finger protein nhl-1 OS=Caenorhabditis elegans OX=6239 GN=nhl-1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000277 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00643 all species →	zf-B_box	B-box zinc finger	Domain	Interproscan
PF01436 all species →	NHL	NHL repeat	Repeat	Interproscan
PF00097 all species →	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315 all species →	Domain	B-box-type zinc finger	Interproscan
IPR001258 all species →	Repeat	NHL repeat	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR018957 all species →	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR047153 all species →	Family	TRIM45/56/19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462 all species →	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0006513 all species →	Biological Process	protein monoubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000020527.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.