Gene detail

Detailed information of ENSQPTP00000020891.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031572269.1, dihydroorotate dehydrogenase (quinone), mitochondrial-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000025579

ggagattCTCTGGCAATGAGCAATGTTTgtcttgggctccctgtgttctCTCTTCGATTCAACATGGCCGCCAAAAATGCTCGTAAAACTTTTTGAgataaaaaagtcaaaaacttgaaaataaattgGCAAAAACCccttaaaatatttcaaaagacTATGTCGTCCTTCAAGGGTAAAGTCTTAAAAAGCATGTTTCGTCACGGTTTCGCACTTGTTGGCTGTACTAGTGCATTATTTTGTGGGTATTTCACCATCAAAGGAGATGAACAGTTTTATAGAAATGTTATAATGCCTGTTATCAAGTTACTGGATGCTGAAAGAGCTCATCTTTTGGCTGTCAAAATGGCGTCCTATGGATTAGTTCCTAGTGATAGAGATGAAGACCCTGAAATATTGAACACCAAGGTATTTGGGCTACAGTTTTCCAATCCTGTAGGGTTAGCTGCTGGTTTTGACAAACAGGGTGAGGCTGTTTCTGGACTGGTGAAAATGGGTTTTGGCTTTGTGGAAGTGGGTAGTATTACCCCAGAGCCTCAACCTGGTAATCAAAAACCAAGAGTCTTTAGGTTAAATGAGGATAAAGCCATCATAAATAGGTATGGATTTAACAGTCAAGGTCATGAAATAGTAAAACAAAACCTGCACCAACGCAAGGTAAAACTCAACCAAGGAATCTTAGGCATCAACCTGGGAAAGAACAAAACTTCAGAGGATGCAGTGTTAGATTACACTAAAGGTGTAGAAGTCTTTGGTCCCATGGCTGACTATCTTGTGATAAATGTTTCATCTCCAAATACTCCTGGACTTAGAGCTATGCAAGGCAGAGAAATGCTGGCTGCTTTAATAGACAAGGTTCTTGAAGCTCGCAGTTCATTACCACCATCCAATCAGCCACCACTGTTGGTCAAGATAGCACCAGATCTCACACAACAGGATAAAGAGGATATAGCTGCTGTAGTCACCAGACCTAATCATCATATCGATGGTATTATTGTGTCTAATACCACTATATCAAGGCCACCAAGTCTACAAAGtgcaaataagaaagaaacagGAGGACTAAGTGGTGAACCACTCCGGACAATGTCCACTGAATTAGTCAGAGTTATGTATACATTAACAAAAGGAACAATTCCAATTATTGGAGTGGGTGGAATCTCATCTGGCCAAGATGCTTATGACAAAATAAAAGCTGGTGCGTCTTTGGTGCAGCTGTATACAGCCCTTACTTATCATGGCCCTCCTCTAGTCAAGAGATTAAAGAAAGAGCTTGCAGACCTTCTCAGgAAAGATGGTTTCAATTCTGTTAGTGAAGCAGTTGGAGTGGATCACAAAGATCATAAACCAAGTGTTTGAATGCTGTTATCAAGTACTAGGATATACGTGCCAAATCTTCTGACCAAGACTCAGCCTCACGTAAATTAACTAACATCTCAGTCAGACTCACACTCATGTAAATTAACTAACATCTCAGTCAGACTCAGACTTGTGTAAATTAACTAATGTCTCAGTCAGACTCAGACTCATGTAAACTAACTAACATCTCAGTCAGGCTCAGACTTGTGTAAATTAACTAATGTCTCAGTCAGACTCAGACTCATGTAAATTAACTAACATCTCAGTCAGACTCAGACTTGTGTAAATTAACTAATGTCTCAGTCAGACTCAGACTAGACTCATGTAAATTAACTAACATCTCAGTCAGACTCAGACTTgtgtaaattaaattacatgTCAGTCCCTTTAGAAGTGTATGCAGGTACAGCAaattaatgaaagaaataatgataaagatgatgataaatgcATCTGCACAGATAAATTAAagctaaaataaaaaatagtaaCAAATACCAGGGGTTTTCGTTGTTTTGCAATCTATAAATGGTATATATATCAAGCATATTATTGTAGTTGTATTAAAATCATCCTGATAGCAAAATAATTTCAGAgtcagagtcaaaagacagaGTCCCTGATCAACCTTGCTTtgcgagggtagcacttaatagctaatttaccattttccatacattgtttcactggtcaaacacaaagcattcaatcCAGGTTTAAAAGGATTATGGATATTTGAACCTTGTAGACTTAATGTTTTTGAtcagtgaaccaatgtatggaatTAGTGGTGAACGTCTAACAAACCTGGGTCTTCATTGCATGATTGAACAGGAATCAAAATGCAGGGAGAGAGGGGGGGAGTTCTTTTATGATAATTTATATAGTCCTTGCAGACAGCACTTTGAGTACTATGCTTGAGAAAGGATA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35435	Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Mus musculus OX=10090 GN=Dhodh PE=1 SV=2
Q5E9W3	Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Bos taurus OX=9913 GN=DHODH PE=1 SV=1
Q02127	Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Homo sapiens OX=9606 GN=DHODH PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004713 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01180 all species →	DHO_dh	Dihydroorotate dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001295 all species →	Conserved_site	Dihydroorotate dehydrogenase, conserved site	Interproscan
IPR005720 all species →	Domain	Dihydroorotate dehydrogenase, catalytic	Interproscan
IPR005719 all species →	Family	Dihydroorotate dehydrogenase, class 2	Interproscan
IPR050074 all species →	Family	Dihydroorotate dehydrogenase	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48109 all species →	DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0016627 all species →	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0004152 all species →	Molecular Function	dihydroorotate dehydrogenase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0009220 all species →	Biological Process	pyrimidine ribonucleotide biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00254	DHODH, pyrD; dihydroorotate dehydrogenase	EC:1.3.5.2	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.