Gene detail

Detailed information of ENSQPTP00000021795.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031563998.1, protein FAN-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000026733

ATGAGTGTTTGGGATAAGGTCAAGAGAAGGCTTGGTACGGTGAATGGAGAGGGATCGGGGCTTTCACTGAACCCTGAGGCTGCGTTTGCTGAGGATCACTACACGAGGTTTTCCCTCCTGCTGCTAGAACCTGgagaaatatattttgaagATTTTAGTGTATTTTATTATCCTTATAATGTACCAGAAGAAGAAGCTATTAAAAGACGGCAGAGAGGAAGGCTCAAGATGTGTTCTAAGTCTATTCTTTTTGACCCCATAGACACTTCTTTTCCAATTTTAAAGTTTCCTTTGAGAGAATGTCTTAGAATAGCTCACTGGACAGGTCCTTTATTATCCAAGATAGATACCAAAGGTGATGTCCTGGTGATTGAATCCAAGCAGGTGATAGAAATGAAAGAAGGGAATATAGTTGCACCATATAGATTTATTAGGgaaaagaagaagtatttattttcattcaacTTTGTAGCCCTGGGGTTTGTGCTCCCTCAGCTAGAACAGCTTAACAGGGCATCAACCCTGACCCCAGCTGACCAGTTGACCATGGTGAATACAATTGTCCAGTCAAGGCAGTCTAAAGTTACATTTAACACTAGCTGGCTGGAAGACTTTTACGAGAAAATTGTAATAGAGACTTCAGCTAAGAGGATCACTCCCCTGGTCTGTAATCCTGGCCGTGTGATGCTAACATGTTCTCGGCTGTATTTCCAGCCATTCAACAATGCGGATCCTTGTCCAGTAGTAAAGTGTAAATTGTCTCAAATAAGTCGGGTGGTAAAGAGAAGATATCTACTGCGTCACGTGGGAGTAGAGATATTCTCTTCAGATGGATCTCAGATGTATTTGGTATTAAACTCACAAAAAGAGAGGGATACTTTTTTTGACGAGCTTGTAGCACAACAAGTTGTGAAGCTGGAAGattctggccaagaaaatatGACATTGAAGTGGCAAAATGGTGCCATTTCAAACTTTGATTATTTGATGTACTTAAACAGtttatcTGATAGGAGTTTTAATGATTTAACTCAGTATCCAGTGTTTCCATGGATACTGGCCGATTACACAAGCGAATCACTGGATCTTACGAACCCGGCTACCTTTAGAGATCTCAGCAAGCCAATAGGAGCATTAAATGAAAGCAGATTACAACAACTCAAGGAGCGGTGTAAAGAAATGCCCGAACCCAAATTTCTGTACGGATCGCACTACTCCACCCCAGGATATGTTTTATATTACCTGGTTCGAGTCGCGCCTGAGTTCATGCTTTGTCTGCAAGGAGGAAAGTTTGATCAGCCAGATCGATTATTCAACAGTGTTGCTGAAACATGGGATAATGTACTAACGGGACATGCAGACGTAAAAGAGCTTATACCCGAGTTTTTTCAGTCGTCGGGTGAATTCTTAATCAACAGTCAGGGTCTTCCTCTTGGTGtaaaacaagacaaaacaaagGTTATGGACGTCGAGCTTCCGCCTTACGCTAAAGATCCAGAGGACTTCATCAGAATCAATCGTGAGGCTCTGGAATGTCCTTACGTATCAGAGCGGCTACACAACTGGATTGACTTGATATTTGGATACAAACAAAGAGGAGAGGAAGCGTGGAAGTCTGACAATGTGTTCTACTATTTGACCTATGAAGGCGCAGTTGACCTTGACAGCATTACAGACCCCAATGAACGAGCATCACTTGAAGCACAGATACTAGAGTTCGGTCAAACACCAAAGCAACTATTCAAGAGTCCCCATCCAAAGAGAATGGCGTTGCCTTCATCTACTAATGGTGTAACAGCTCAAAACGACGTTGCGatcaaaaatgaagaaaaagaaccGAGGGCAGAGAAAATACCAGTAGTGAACGTCAGTGTTGACTTTGATGACAGTGCCGAGCCAGAACTAGATCACTGGGGCAGCATTGATAAACTAGAAAAAGCGTCATGTCACAAGCTACACAAAGACACTGTCACGTCAGTACGACTTTCCAAAGACTGTAAACATGTGTTCTCTGTTTCACAAGATACGCAACTGAAGATCTACTCGttagaagaaaaacaacaaatacgAAGTATAAATCTCTCTTCAATGGCTCTTTCTTCGTGTGCCATTATGCCTGATGCTAAAACAATCATAGTTGGTTCATGGGATAATAACATatACATCTACTCAGTAGAATATGGTCGTGTGGTAGACACGTTAAGAGGACATGATGATGCAATATCATGTTTATGCTGGAACGATGGAATACTAGTTACAGCCTCTTGGGATTCTACAGTCAAAGTATGGAAATTCCTTCCCGAGCCAGACGGCAAGAAACCAGCTTCGCCGCTAATACTGgCGGAGTTGGATCATGACACAGAAGTGAATACGGTGGATTTAGATCCTACCAATACCCTTGTAGTTACAGGGACTATGGATGGTAATGTTCTTCTGTGGAATATCGATCAGCAAACAATATTAAGTCAACATCATATTCATAGAGAGACAGTACACTCAGTTCTCTTCAGTCCAGACGGTCAAAGAATTTTCTCGTGTGGTTCTGATCACTCGATGAGAGTGACAGACGTGCAAACCGGAACAGAAGTCTTCTCGAAAAATGCAGGCGAAGAAATAAGGTgtgccgtgtgggatgggcaaATGGTTCTAGCAGGAGGAGAGTCCGGTGATCTTCAAATATGGGACTTATTTCATGTACAGCAAATAACAAGCATTACGGCGCATAAAGGTGCTATTCGATGTATTGACGTGTCAGGTGATGGGTGTTTCGTAGTAACTGGAGGAGAGGATGGTCAAGTCATTCATTGGAAAATCAAAGTTTAA

Transcript

ENSQPTT00000026733

TGAGCCGTCCGAACACAATGAAGGAAACTATGTGGCGTCAACAACGCAGAAAACGCACGAAGATTATAACACTGAATTAGTTCTTCCTTTCCTACAACGTCAGGAAGATAGAGGAGCTATTTTATTGAAAGAGGCTTTTTTAAATATCGGAAAAAATGCGCAGACAAAGGGAACGTCAATAGCAGAGATCTCAATGAGTGTTTGGGATAAGGTCAAGAGAAGGCTTGGTACGGTGAATGGAGAGGGATCGGGGCTTTCACTGAACCCTGAGGCTGCGTTTGCTGAGGATCACTACACGAGGTTTTCCCTCCTGCTGCTAGAACCTGgagaaatatattttgaagATTTTAGTGTATTTTATTATCCTTATAATGTACCAGAAGAAGAAGCTATTAAAAGACGGCAGAGAGGAAGGCTCAAGATGTGTTCTAAGTCTATTCTTTTTGACCCCATAGACACTTCTTTTCCAATTTTAAAGTTTCCTTTGAGAGAATGTCTTAGAATAGCTCACTGGACAGGTCCTTTATTATCCAAGATAGATACCAAAGGTGATGTCCTGGTGATTGAATCCAAGCAGGTGATAGAAATGAAAGAAGGGAATATAGTTGCACCATATAGATTTATTAGGgaaaagaagaagtatttattttcattcaacTTTGTAGCCCTGGGGTTTGTGCTCCCTCAGCTAGAACAGCTTAACAGGGCATCAACCCTGACCCCAGCTGACCAGTTGACCATGGTGAATACAATTGTCCAGTCAAGGCAGTCTAAAGTTACATTTAACACTAGCTGGCTGGAAGACTTTTACGAGAAAATTGTAATAGAGACTTCAGCTAAGAGGATCACTCCCCTGGTCTGTAATCCTGGCCGTGTGATGCTAACATGTTCTCGGCTGTATTTCCAGCCATTCAACAATGCGGATCCTTGTCCAGTAGTAAAGTGTAAATTGTCTCAAATAAGTCGGGTGGTAAAGAGAAGATATCTACTGCGTCACGTGGGAGTAGAGATATTCTCTTCAGATGGATCTCAGATGTATTTGGTATTAAACTCACAAAAAGAGAGGGATACTTTTTTTGACGAGCTTGTAGCACAACAAGTTGTGAAGCTGGAAGattctggccaagaaaatatGACATTGAAGTGGCAAAATGGTGCCATTTCAAACTTTGATTATTTGATGTACTTAAACAGtttatcTGATAGGAGTTTTAATGATTTAACTCAGTATCCAGTGTTTCCATGGATACTGGCCGATTACACAAGCGAATCACTGGATCTTACGAACCCGGCTACCTTTAGAGATCTCAGCAAGCCAATAGGAGCATTAAATGAAAGCAGATTACAACAACTCAAGGAGCGGTGTAAAGAAATGCCCGAACCCAAATTTCTGTACGGATCGCACTACTCCACCCCAGGATATGTTTTATATTACCTGGTTCGAGTCGCGCCTGAGTTCATGCTTTGTCTGCAAGGAGGAAAGTTTGATCAGCCAGATCGATTATTCAACAGTGTTGCTGAAACATGGGATAATGTACTAACGGGACATGCAGACGTAAAAGAGCTTATACCCGAGTTTTTTCAGTCGTCGGGTGAATTCTTAATCAACAGTCAGGGTCTTCCTCTTGGTGtaaaacaagacaaaacaaagGTTATGGACGTCGAGCTTCCGCCTTACGCTAAAGATCCAGAGGACTTCATCAGAATCAATCGTGAGGCTCTGGAATGTCCTTACGTATCAGAGCGGCTACACAACTGGATTGACTTGATATTTGGATACAAACAAAGAGGAGAGGAAGCGTGGAAGTCTGACAATGTGTTCTACTATTTGACCTATGAAGGCGCAGTTGACCTTGACAGCATTACAGACCCCAATGAACGAGCATCACTTGAAGCACAGATACTAGAGTTCGGTCAAACACCAAAGCAACTATTCAAGAGTCCCCATCCAAAGAGAATGGCGTTGCCTTCATCTACTAATGGTGTAACAGCTCAAAACGACGTTGCGatcaaaaatgaagaaaaagaaccGAGGGCAGAGAAAATACCAGTAGTGAACGTCAGTGTTGACTTTGATGACAGTGCCGAGCCAGAACTAGATCACTGGGGCAGCATTGATAAACTAGAAAAAGCGTCATGTCACAAGCTACACAAAGACACTGTCACGTCAGTACGACTTTCCAAAGACTGTAAACATGTGTTCTCTGTTTCACAAGATACGCAACTGAAGATCTACTCGttagaagaaaaacaacaaatacgAAGTATAAATCTCTCTTCAATGGCTCTTTCTTCGTGTGCCATTATGCCTGATGCTAAAACAATCATAGTTGGTTCATGGGATAATAACATatACATCTACTCAGTAGAATATGGTCGTGTGGTAGACACGTTAAGAGGACATGATGATGCAATATCATGTTTATGCTGGAACGATGGAATACTAGTTACAGCCTCTTGGGATTCTACAGTCAAAGTATGGAAATTCCTTCCCGAGCCAGACGGCAAGAAACCAGCTTCGCCGCTAATACTGgCGGAGTTGGATCATGACACAGAAGTGAATACGGTGGATTTAGATCCTACCAATACCCTTGTAGTTACAGGGACTATGGATGGTAATGTTCTTCTGTGGAATATCGATCAGCAAACAATATTAAGTCAACATCATATTCATAGAGAGACAGTACACTCAGTTCTCTTCAGTCCAGACGGTCAAAGAATTTTCTCGTGTGGTTCTGATCACTCGATGAGAGTGACAGACGTGCAAACCGGAACAGAAGTCTTCTCGAAAAATGCAGGCGAAGAAATAAGGTgtgccgtgtgggatgggcaaATGGTTCTAGCAGGAGGAGAGTCCGGTGATCTTCAAATATGGGACTTATTTCATGTACAGCAAATAACAAGCATTACGGCGCATAAAGGTGCTATTCGATGTATTGACGTGTCAGGTGATGGGTGTTTCGTAGTAACTGGAGGAGAGGATGGTCAAGTCATTCATTGGAAAATCAAAGTTTAACAATAGCATTACTGTTGCCTTGGTAATATGCTCAGCTTCATTGGCAGCGAAGCCGCGTCGTGGAGCTGAACATGTACGGTTATATTTAGTTAGACTTCAAAGCCTATGTTTAGATATTTGATAAACTGAAGATGCATAGGTTTGTTGGCGAGAAAAGTGATGCTCAAGGCAACGTTTGTTACAGTGGTAGTCATGGTAACCGTGGTTATTATGGTAGTCTTGGCAACCGTGGCTACAGTGGTAGTCATGGTAACCCGGTATAATTTTTTATAACTGCCATAATGAACGGAGATTCATAGATGCGCGAAGTATCTACTATTGGTGGACATAGTCATGAACAACCATCTATGATCTTGACTATATGTATCGCGTGATGATCATCACGTGGCCCTACGATCCTTATATACCCCAGGTGATCGTATTCACTGTACCTCACTGTACAAAGAGGTCATCGTTATCGTTATTTTCTCAATCGattgttgaaaaaaaatcacattATTTAATGagcaaaaaattatcaatttgcGTCTATGACAAGCAAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35242	Protein FAN OS=Mus musculus OX=10090 GN=Nsmaf PE=1 SV=2
Q92636	Protein FAN OS=Homo sapiens OX=9606 GN=NSMAF PE=1 SV=2
Q54PP7	BEACH domain-containing protein lvsF OS=Dictyostelium discoideum OX=44689 GN=lvsF PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002210 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF14844 all species →	PH_BEACH	PH domain associated with Beige/BEACH	Domain	Interproscan
PF02138 all species →	Beach	Beige/BEACH domain	Family	Interproscan
PF12894 all species →	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR000409 all species →	Domain	BEACH domain	Interproscan
IPR050865 all species →	Family	BEACH Domain-Containing	Interproscan
IPR023362 all species →	Domain	PH-BEACH domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036372 all species →	Homologous_superfamily	BEACH domain superfamily	Interproscan
IPR024977 all species →	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13743 all species →	BEIGE/BEACH-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18953	NSMAF, FAN; factor associated with neutral sphingomyelinase activation	-	Sphingolipid signaling pathway	ko04071	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.