Gene detail

Detailed information of ENSQPTP00000022815.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031570505.1, uncharacterized protein LOC116304858 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000028003

ATGGTTTTGCTTCTTGTGCATCTAGCTGCTATTGCTCTCCTGGTTAGAGTGCTTGTCTTGATTGCCCTGAAGTTTGTTGTGGACAACTTTGGAAAAGGCCTTCGGGAGTCTGTATATAACCTGCCAGTATCAGATGACCAGCCACCTCTTCTTCCGAGGAAAAGAGATATTGCTAAATGCTGTGGCATTTTGAAGGTTTTTGCTAAGAAATTGTTAAATAAGCAAGAGTACTTACATTTCAAAAGGGCTTTAAAATCGTTCGAAAAGGATGAACGCGTTTTAGATTTCTGTATGGATTTGTTGGAAATTGTTAATGCTCCGGAAAAGACAGAAATACTCGTGGAGGCGAGGAAAATGCTGCCCAAAAGCAAACAGTCTGAGTTCAGTAAAATTTGCCGTGATCTTGTCAATGAAAGATGGACGATATCTGGTAAGAGTTCGTTACACTACGGCCTAGAATGCAATGAGAATCGTGATGGACTACCGACTGGAAGTCCTGCCAAGAAAGCTAGACAGTTAAGCGAAGGAGGTGACCCTTCTTACGAACGAAAGCATCCCAATACTAACGTATTAAGGATGGAAAGAGAATCAAATTCGGTTAATTTTGGCTTTAAAATCTTAGGTGACTTGTTCACTGAAAGAGAAATAGTCGTTAGAGAAGTTGACAAGCAGTCCATTGCAGAAAGAGCAGGACTCCGTGCGAGAGACAGAATTACAAGAATAAATGATATGAGCTGTGAACGAGCAAGAAAATCTGACATAGTGCATCTAATTAAGTCCGAGAATGTGTTAAAATTGACTGTGATGAGCACTAAACATTTTAAGGAGGCACAAGACATAGATGTAGAGGAAAGGGCGGTTGCTATAGAAACCACAGAAGTTCACGATTATAATACCAAGAAAGTAGCTATTTATACCAACGAAGATGGTTGGATGGGATGTAGCATTAGAGGGGGAATGGATTACAGGTGTAAAGTGCATATCATTTCTGTTGCTGATGGTTCACCGGCAGAGAGTGCTGGTCTCAAACAAGGAGATATCATCACTGAGGTTAATGGCATTAGTCTCAAAGGCTGCACACATGTTCAGGCTGTAAATCTTATCCTAACAAAGCCAGAAAGCCAGAATGCTAACAATCTTCCCCATACTCCTCTGAGAATCAATAATTGCAGGCCAAGAAGACTTGAGCAGGGTGCATCAGATATTGCTCCCTGCCTATCACCACtcccactaccaccaccacttcCTGGCTGTTGGTACCAGAATGACAGCCCCTCTGTTGGTGCTAGTGGTGTTGTGAGTTCCCCTTCGGCTCTTCCTCTGAATACCTTGCACCTGGATGGTACACCACCCCCACCATACACTGCCGAGGTTCCCCAGATGCACAAAGTCATTCAGATGGGAGGCAACGCCAGGGAAAATAGAAACAATAGCAATCATGGTCTGCTTCTGCCCATGGAAAGTGACATGCCTTATCAGCATAGTTCAAGAACATTGCAGAATGAGGAGTTGACCACTGAACAGTCAAGAGAATCAGAAAGAGATGCTGTACGACATTCCACTCATAAAGGCAATGATGTTTCTTCTTTAAGTAAAAACGCCTCTTGTTTGCTTGACATTGAAACCTCGTCAACAGGAAACACCTACATAGTTCTTCAAGATGCTGAAATCAATGATGCTTCAGGTAATCAAGCAGAGTCTAATTCTGAGAAAGAGGGGGCAAACACAAAGCCAAACAGTCAATCCTCTTTACTGGAAGCCATCAGAAATTTCAACACAGGATCACTAAAAACtgctaaagaaaaaaatactttacaCACTCCTGGTAAATTGTTTCCATCAAGTAAAGCAAATGATTCTCTTAAGGCTGATACAGAGCATGTTATAAGAAATGGAAGTTCAGTGTCCAATGAATATCAAGCTGTAGAGCTGTGTAGTGAAGCTGATCTAAGGAATATTATAAATCAGGCCTTGAAGAAGAGAAGAGCAGACATTTTGGATTCCTCTCAAGAAAGTGTTAATGAGAGTTACTGCAGTGAATGGGATCTTTAA

Transcript

ENSQPTT00000028003

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010497 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17820 all species →	PDZ_6	PDZ domain	Domain	Interproscan
PF00595 all species →	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478 all species →	Domain	PDZ domain	Interproscan
IPR036034 all species →	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051844 all species →	Family	Sensory Perception USH2 Complex Protein	Interproscan
IPR041489 all species →	Domain	PDZ domain 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23116 all species →	PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002142 all species →	Cellular Component	stereocilia ankle link complex	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0032426 all species →	Cellular Component	stereocilium tip	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000022815.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.