Gene detail

Detailed information of ENSQPTP00000022891.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031549186.1, uncharacterized protein LOC116286747 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000028093

ATGGATGGAAAGAAGATTGATATTAAAGTTATGAAGCTGATAGATGCAGGTCATTTTAAAGCATCACCCATCGTCATGCCAGGCTCTGAGTTTGAGAACTTCATGGGAAGACTGAATGACTATTTCTTGTATCAAGGAAACAGGACTTCTAACTCTATAATCCCTGAGAAAGAAAAGCTCTATGTGGTACAACGCACAATGGATAAATGCTGGTACCGCGCAAGAATCCAGAATATCATGCAGACAACTGCAGGTCCTCAAGCAAGtGTGTTATTGGTAGATGTCGGAGAACAAACCTTAATACCTTTTTCCAGGGTCTGTGAGATACCAAAGGAGTTTGAAAACATTCCATTTCAAGTGATGGAATGTATCCTGACAGCAGTAAAGCCTCTCAGCTTGGTTACATCTTACTTTGATCTCACAACTACAAAACAAGTCAGTGACAAGTGGACTGAAGCTGCAACCAAGTTTGTTCTTGACCTCATCCATGGCTGCAAGCTGCAAGTAACGATCCAGAAAGAAGATGATAAGGGTAGATACCATGTGCTACTCTACGCAGAGTCCCTTGACAAAGAGgtttGTGTCAACGATGAACTTGTTCAAAGAGGGTTTGCAGTATTTGATGATTCACAGTCAGTAAAAGATGAGAGCCCACGAAAAACAGAAAGACTCAGAGCACAACAAGAACAGTTTGTACAAGCTCAACAAGAGGTTGTCAATGCCTTCAAGAAGAGTATTCACATGCCAAACCAACAGTACAAGGACGAGAAGCCACAAGAAAGCACGAGTACTGACGATGAATTTCCTTCCCATCGTCGAAGCTCTTTTCAAGAAGATGTCAGAAATTTCAACCCTTTAGACGTTCTTCGACAACAAGTCGCCGAAATTCGAACACCAAGACCAAATAGCCTGCCTGTTTGTTACATTCCTGCTGGCGCTGAGAATAGGTCTTCATCTTCACTCCCTTCGTATAAAAAGCAGGGAAAAACGATGTCTCAAGAACGTGCTTCTGATTTTAGAGAAAGAGACGCCCAAGGTAGAGAAATGTTCTCACCGTCAAGTGATGAGGATTCAGGAAGGGTGCACTTTGTTTCTGCAAGGATACCCGCCACTGGCAGCGGTGCACGGTATTTGTCTAAAGACAATGATACTGCTAAACTGAAGTCAATACTGAAGTCTAGTAGAACTGGGAATCACTATAGTAGTTCGTCTAGTGATCAGGAAACTGGGAGATACAGAGTGATGGAACAGCGGGATGAACTAGCGAAGAATAGAATGAATATTGACAGTAGCTCCCTACAACACCCAAGTAAAATGGAAACTGCTGTTTCACCAAGGGCCAATGGAGAATTCGCTGATACCGCCACAGAAGTAGGGCGGCAGTCTTGGGCATCGCAGTATCCCACTGAAAGGATAGCAGCAAGTGTTTCACCGAGAGAAGAGTTTGATGGAGCTTCCATTTACAACGCTACGCATCCCTTGGGAAGATTGCCAGGTTTGCCTCCAAGGGTACAAGAGGAATTCGCTCATGGTCACACAGAAATGGATGCACCCTTATCCAGGCAGCATACCGGAGAATGGGCAACTGATTCTGCAGGTTCTAGGGTTGCCAAGGTGATGGATCAGCAGCATTTGGCTACACAGGGTCACACTGCAAGAATGCCAAATATGTCTCCAAGGGCGAGAGAAGAATTCACGCAACGTCCCCCAGAAGTGGCTCAGTCTTTGTCGCATGGAATGCCGTCGCAAATTCTTCCTCGATCATCAGATCGGCTATCTGAAGAGattgtgaaaaaaaacaatgcaAAACCTACATCTCGTCTTCCTTCAGAAATATTGGCACAATGCAACTCAAAACCGGCCTCACGCCTTCCCTCAGACCTAGTCTCTCAATCTTCTCCTTCGTCTTGTGAATCTGTGTCCTCCCTCGAAGACGGCGTGTTAATCCATGGGGATGGCATCCCAAGGCCGTTCACAGCGTTAGCAAACTGTCCTCTCTACGAATATGGCTCAAGACTGGATATCCAAACTCCTACTCCATTGCAGAGGCACATGTGGCCGGCGCTCCTCCGAGGGAGAGATGTTGCTGCGGTTGCGCCCAAGATCGCGGGAAGAAAAATGGCGTACTTGTTACCGATTGTTGACCAGGTCTTGGACCCTGCTGCGTATTCAGAGTTACCGCTAACTAATGGGCCTCTAGCCCTGATATTGTGCAGTAGTTGGAGCAACGCCATAGACATCTACAAAGAATGCAATAAAATCCTTGGTCCTCGAAGAAGAGCCAGAGTACATGTTATATTCGGCGGAGGagcagaagaagaacaagTTGTCCCACTCATCAATGGCTGCGAGATACTCGTCGCTactgttccttgcttcctACGCATGCTCACAAGAAGCTACACCACGCTGGACCGACTCTGCCACATTGTCTTTGACAGTGCAGACTTCCTTGTCGAAGATTTTACCACggaattaaaagaaattatgAGAGTTTATGGTCGATTGTTGGTGTCTAAACCCGGTCGTGTTGCTCCACGCCAAGCTGTTATCATGACGTCGTCGTGGACCTTAGGAGTGGCGTCCTTGGTGCGTGCGTATCTTGGTAACCCATTGATCATTATGGATGACAAGGTTGAAGCCACTATCTACTCTGGTGTTAAACTGGCTGTGGAACTTTGCTCGGCCAGTAAGAGGCTTTCAAATCTTTTAGGATTTCTAGAAAATGCCGACAGGACACACGAAATTGTCATATTCACAAACACAGCAGAGGAAGCTGAGAACCTTGGTGAAGCACTGAAAACAAGCAGTTATTTTGTGCTCGTTGCTCATGAATTTATAAATCCGCAGCAATTGGCCGATACTAGAAGACAATGGTatactccacacagcacagacCTGATGCCAATACTAGTGATGACGGACGGAGTTCTCATGAGCAGACAACTCACCGTACAGAACGCATCAATGGTCATCCACTACGACCTGCCGCTCGTCAAAAACAAGGAGAAGTTTGGAGAACGATTTTTCACCATGTCTAGGACATTCACATCAACTAAGgaTCATGGATGCTTATCAGTCATATTCATCACAGAGACCTGTCTGCGTCAGTCAACCATCGCCCACCAACTAGTGCAAAGAACATCAGAACACAGACCAGCTGAAGACAGCACTACGGATGGGGATTCCGTCAAACCTTGGAAGATTACTTCTTCTTCTCTGGAGGAAATGGCCAAGGAAGCTCGTATGgcaaaagaaagagagaaatttAACTACGAACTGTGTGATTTTCTGATGGCTTACGGATCATGCAGAACTTTTTCAGACAAACGCAAGTGTAACATGAGACACGTGGTGCTGAAAGACGAAGACCTCCCCTGCCTACCGACCAACGGCAGCGTCAAGGTGCTTGTTCTTCACGTGATGAATGCAACTTGTCTGTGGGTTCGCATATTAGAACATAAAGCCCCCAAAACCGTCAAATCCACACCATACAACATCACGACAAGTACGCAGTTCCTACAGATGACAGTCGAGATGGGAATGTGGTACGCTAACGAGAAGAACAGAACGAGAATTGATATGCCAAGAATATCTGATCTCTATGCGTTGGAGCAGGATGGCTCATACCATAGAGTGAAAGTCTGTGATGTCGTGCGGGAAATGCCTCAGTCAGGTTTACCTCTGGAAGCACAGGTTCATTTCGTTGATAAAGGCACGTACCAAGATGTCAAGGTTTCATCGCTCCTTTGTCTTCCTTCACAGTTCCGTGATTTTCCACTTCAGGCTGTTCAAGTCTTTGTCTGTCGTGTCAAACCACAAGACAAGAGTCTTCAATGGACACCAAAGgtcttgttgtcTTTCCTTGGTAACACGATGTGGCTGGATCCTCTGTTTGAGAGAAGAGTACTGAAGAGTATCAATGTGACAACCAATATTAATAACATCAGAATGGAGCTGCTGAAGAATGGTCTTGCTACGGAGAACAAATATCACATTAAAGAACTACGAAAGCTTTGCGAGGATGTTATAGACCTTTCTATCTTTGATGGAAAAAATGCCGAAGGCAGTGGAGATAGTTATGACTCATCAGTATCACTGGAGACTGTTGCattgaatgaaaatgattATCAAGATGTGTTTGTGTCAGCTGTGGAAAACCCTAGctttttctttgtacaaatGGCTGCCAACGATACGAGTCTGGATGAACTAGAACGTGCAATAGAAGAAGGCATCCACTGTGTGAGCTACGAAGACGACGATGAAATCCCTATTGGATCACTCTGTATGGCGTGCTTTACTAAAGATGACAAATGGTACCGTGCACGTGTCCTGGGCACGAAGCTTGATAACGAGTATGACGTGTTCTTTGTCGATTACGGTGATCGTGAGTGGTTGACGCGCAGCAGATTACGTCCAGTGTGGCCAGACATCCTTACTGTTCCTCTACAGGCTGTCGAATGCTCATTAGTCAACGTCAAATCCAAAGTGGCTTCGCTCATGTCTGGATGTCATCGATTTGTAGTCGAGCTGTTCGATACGTCGACAAGTATCGACATCGTAATGAGCGAGGAACTAGTAGCAACAGGACATGCGCAGACTTCGCCTGAAGGAATCCAGTACGAATACGAGAAGATTCCTGACATGTGCAGAGATATCCTGCAGTCTCGGAATTGCTCCTATATTATAACGATTTTTATAAGAAACTTATGCATTTCTCTTCTATATTACAGTGCTAAGGATGCCATACGCGAGGGGGGTGGTGTGAGGTCGTTATGTCGTCTACTAGCACTGACCAGAGCACCTGCCGTTCAAGAACACTTGTTGGTTAGTCTGGATTGTTTGACCTTCCAAAATGACAGTAATTGTGATGAAGCAAGGAGAGCAGGTGGACTAAAGACGCTGTGTTACCTGATGGACAAGAGCCGCAACATGTCCGTGAAGTCACATGTTGCCTGGACACTGAAGAATCTTGCTGCAACCGAAACAAATCAGGACACTATTCGTGACCTTGATGGGATTAAAGCACTATGCAACGAGTTAAAAGCTGCAACAGACGATAAGCTACAAGAACACATTGCCTGGGCACTAGAAGTATTGTGCATGGACAACAATAAAAACTGTGAAGCAGTTGATGAACACGGTGGAGTAAAGACCCTTTGTGGGCTGGTCTCCCACACAACCCAACAGAATGTCCTTGAGAGGACCACAAGGGCCCTTAGTGCTCTTGCTTCGACACCAAGTAATCGTAATCTGATTCGTCAACATGGCGGACTGAAAGGTATTTGTCGAAGGATTCAAGACAACCCTGAAGAAACTTATCTCAGGACTGCAACGGGGACGCTGAAAGTACTCGTTAGCAATAACCAACACAATAAAGAGGTGATGCGAGATATGGGCATGATTCACACACTACAAAAACTGACAACATCGTCTCAGTTGAGTTCCATCACACGTCGTCTGTGTTCAGATTTACTCCAGAGATTAATAGGTTGGGCAGCAGTTGGCTTTGACGTTGGTTTGTCTCCCGACAAAGCACCTACTACACTCCACTACCCCTCCCCACAGGCAACAAATGGAACCATGGAAACGAGGACTGACATTACAAGACCTAAGCTCAGTAATGGGGTTGATAATGATGTAGACGATATGCCGCATCTTGAGGGGTCAGACGACGAGGAGCATGGAGAGATACCTCAAGTCAATGAAGAAAAGGCAGGCAGTACACACGATAGAGCAAAGATATCCACGAAACAGAAAATAACGCCTCTGATGCCACAGCTTTTAAATCAAAGTAGAGAAGACACTCGTTTAGCAGATGAAAACGATAACAAGAGATACAACCCTTTCACATTCTGGTCACAGACTAAGGATTTGGTTCGAGTAGCTGTTCGTTTACGAGGAGTAACGAAACACCAAACTGaaatacaagaaaagaaactaCTGTTCagCACAAGGATGCAAGGCAAAAACTACTCTTTGGATCTGGAGCTGTATGATTCTGTGATCACAGAGGAAAGTAAGGTTGAAGTCAAAGGAGATGAAGTGTTGATCTTACTCAAGAAAACCAAAAAGACAAGCTGGCCACGATTACTGAAAACCAAAGATAAGTTTGCCTTCCTCAAAATCGACATTGATCGTTGGGAATGGTCCACGTCAGAAGACGAAGAGGACACGGCAATGGATGACAAAAACCAAGAAGCACCAAAAACACCAAGCCAAGACAAGAAAAGCCACAAACAAGCCATTGTACCCGAGATGGACACCAGTGATTCAAGCAGCTCTGATTCTGAAGATGAAGACATGGACTATAGAGattttttgagttttgattga

Transcript

ENSQPTT00000028093

Protein

ENSQPTP00000022891.1

MDGKKIDIKVMKLIDAGHFKASPIVMPGSEFENFMGRLNDYFLYQGNRTSNSIIPEKEKLYVVQRTMDKCWYRARIQNIMQTTAGPQASVLLVDVGEQTLIPFSRVCEIPKEFENIPFQVMECILTAVKPLSLVTSYFDLTTTKQVSDKWTEAATKFVLDLIHGCKLQVTIQKEDDKGRYHVLLYAESLDKEVCVNDELVQRGFAVFDDSQSVKDESPRKTERLRAQQEQFVQAQQEVVNAFKKSIHMPNQQYKDEKPQESTSTDDEFPSHRRSSFQEDVRNFNPLDVLRQQVAEIRTPRPNSLPVCYIPAGAENRSSSSLPSYKKQGKTMSQERASDFRERDAQGREMFSPSSDEDSGRVHFVSARIPATGSGARYLSKDNDTAKLKSILKSSRTGNHYSSSSSDQETGRYRVMEQRDELAKNRMNIDSSSLQHPSKMETAVSPRANGEFADTATEVGRQSWASQYPTERIAASVSPREEFDGASIYNATHPLGRLPGLPPRVQEEFAHGHTEMDAPLSRQHTGEWATDSAGSRVAKVMDQQHLATQGHTARMPNMSPRAREEFTQRPPEVAQSLSHGMPSQILPRSSDRLSEEIVKKNNAKPTSRLPSEILAQCNSKPASRLPSDLVSQSSPSSCESVSSLEDGVLIHGDGIPRPFTALANCPLYEYGSRLDIQTPTPLQRHMWPALLRGRDVAAVAPKIAGRKMAYLLPIVDQVLDPAAYSELPLTNGPLALILCSSWSNAIDIYKECNKILGPRRRARVHVIFGGGAEEEQVVPLINGCEILVATVPCFLRMLTRSYTTLDRLCHIVFDSADFLVEDFTTELKEIMRVYGRLLVSKPGRVAPRQAVIMTSSWTLGVASLVRAYLGNPLIIMDDKVEATIYSGVKLAVELCSASKRLSNLLGFLENADRTHEIVIFTNTAEEAENLGEALKTSSYFVLVAHEFINPQQLADTRRQWYTPHSTDLMPILVMTDGVLMSRQLTVQNASMVIHYDLPLVKNKEKFGERFFTMSRTFTSTKDHGCLSVIFITETCLRQSTIAHQLVQRTSEHRPAEDSTTDGDSVKPWKITSSSLEEMAKEARMAKEREKFNYELCDFLMAYGSCRTFSDKRKCNMRHVVLKDEDLPCLPTNGSVKVLVLHVMNATCLWVRILEHKAPKTVKSTPYNITTSTQFLQMTVEMGMWYANEKNRTRIDMPRISDLYALEQDGSYHRVKVCDVVREMPQSGLPLEAQVHFVDKGTYQDVKVSSLLCLPSQFRDFPLQAVQVFVCRVKPQDKSLQWTPKVLLSFLGNTMWLDPLFERRVLKSINVTTNINNIRMELLKNGLATENKYHIKELRKLCEDVIDLSIFDGKNAEGSGDSYDSSVSLETVALNENDYQDVFVSAVENPSFFFVQMAANDTSLDELERAIEEGIHCVSYEDDDEIPIGSLCMACFTKDDKWYRARVLGTKLDNEYDVFFVDYGDREWLTRSRLRPVWPDILTVPLQAVECSLVNVKSKVASLMSGCHRFVVELFDTSTSIDIVMSEELVATGHAQTSPEGIQYEYEKIPDMCRDILQSRNCSYIITIFIRNLCISLLYYSAKDAIREGGGVRSLCRLLALTRAPAVQEHLLVSLDCLTFQNDSNCDEARRAGGLKTLCYLMDKSRNMSVKSHVAWTLKNLAATETNQDTIRDLDGIKALCNELKAATDDKLQEHIAWALEVLCMDNNKNCEAVDEHGGVKTLCGLVSHTTQQNVLERTTRALSALASTPSNRNLIRQHGGLKGICRRIQDNPEETYLRTATGTLKVLVSNNQHNKEVMRDMGMIHTLQKLTTSSQLSSITRRLCSDLLQRLIGWAAVGFDVGLSPDKAPTTLHYPSPQATNGTMETRTDITRPKLSNGVDNDVDDMPHLEGSDDEEHGEIPQVNEEKAGSTHDRAKISTKQKITPLMPQLLNQSREDTRLADENDNKRYNPFTFWSQTKDLVRVAVRLRGVTKHQTEIQEKKLLFSTRMQGKNYSLDLELYDSVITEESKVEVKGDEVLILLKKTKKTSWPRLLKTKDKFAFLKIDIDRWEWSTSEDEEDTAMDDKNQEAPKTPSQDKKSHKQAIVPEMDTSDSSSSDSEDEDMDYRDFLSFD

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2W6	Tudor and KH domain-containing protein OS=Homo sapiens OX=9606 GN=TDRKH PE=1 SV=2
Q80VL1	Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1
Q0UK12	ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=RRP3 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002813 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00514 all species →	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan
PF00565 all species →	SNase	Staphylococcal nuclease homologue	Domain	Interproscan
PF00567 all species →	TUDOR	Tudor domain	Domain	Interproscan
PF04969 all species →	CS	CS domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR016071 all species →	Domain	Staphylococcal nuclease (SNase-like), OB-fold	Interproscan
IPR008978 all species →	Homologous_superfamily	HSP20-like chaperone	Interproscan
IPR035437 all species →	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002999 all species →	Domain	Tudor domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR007052 all species →	Domain	CS domain	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22655 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0042078 all species →	Biological Process	germ-line stem cell division	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18409	TDRD12; ATP-dependent RNA helicase TDRD12	EC:5.6.2.5	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.