Gene detail

Detailed information of ENSQPTP00000023337.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_044170674.1, uncharacterized protein LOC122954719 [Acropora millepora]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000028614

ATGCTAGCCAGCACACTGTCATTGACAGCGGTCCTTCAAGTACCCCACTTAACGTTAACAAGGAAACTCTGGTGCAATCTCCCTGATCTTCCTTCTCGTGGCCCCTCGTATTGGAAATTAAATGTCTCTGTCCTTGAAGAAGATGACTACTTTCTCCTAATTTCTGACTTCTGGAAACAATGGCGCCTTCAAAAACTGCACTATAGGTCGCCTCTCGTCTGGTGGGATGTAGGAAAACTTCGAATTAAGGAAATCTCTATTAGATACTGttctaaacgccgaaaacaaACTAGGGCTTATCGTAATTCTCTTCAACAAAATCTTTCCTCTCTTCAAAACCGCGTTGATAACGGCGATATTTCTGCTATTCCCTCTCTTCAGTCCTCAAAACTCAGATTAGTCCAGCTAGACAATGAGGAAGCTAAAGCCAGCAAAATCAGAGCCAGAGCCCAACTATTTCATACTGGCCCTGAATCTTCAGTTATCGTTAATGGCTTCTTTACTAACTGGTTTTCTCTTTCTCGTGGTGTCCGTCAGGGTTGTCCTCTCTCTGCTGCTCTCTATGTTCTTGTTGCTGAGACTCTAGCTTGTAAACTACGCTCTTCACAGATCCTCAAAGGCTTGTCTCCTCCTCAAACTAATTTTGAACCCAGTCTCATTTCGCAGTATGCTGATGATACTACTGTTTTTTGTACTACTGATGATGACATCCGTGAAGCTTTTTCCATCTATCAGCAATATGAATCTGCCTCTGGTGCTAAACTTAACATGGAGAAATGCAAAGGTCTTTGGTGTGGATCCTGGAGAGGTCGCCTTAACTCTCAATTCACTATTCAGTGGTCTTCCACTTACATTGTTTGTCTGGGTATTGCTATTGGCCATGGTGACCTATCGCATGAAAACTGGGATCATCGTCTTGCAACATTTTCAAACATCTTACATTCCTGGAGACAACGTTCTTTGTCCTATTCGGGCAAGGCTCTTGTCTTGAATGGTCTTGCTCTTTCCGGTCTCTGGTATTCCGCCACTGTTCTTCCTTTGCCAAATTGGGTTTTActcaaaattaataaaaaaatcagttcTTTCTTTTACTCTAAGAGATATCTCCCAATCTACGAGAAAACGCTTATGCAACCTCAGTCCAGAGGGGGCTTTAATCTTGTCTCTGTAGCTTATAAAGTTAACGCTCTGCACATCATGTGGGTTCGACGGTTCTTGTCTACCCCAAACAAGTGGTgtgcctttttttcttttttcattcagaGGGCTTTCATTGACAATCCGAATACAGTTCTTGCTACACCCGCTTTTTACCCTTCTGATTGTCTCCCTCCTTTCTATTCATCAGTTTTAAAATCTTGGTGTCTTATTGGTGGATATCTCTCGGCTGGTCATCTTGGTTACGTTGTTCCCAAGCCATATACGGGACAACCCTTTTCCATCCTTGCATTAACTACCAAGATGACCTACACTTTCCTAATTGACAAAGTTTCTCAGCCCCCTACTTTTCGTGATCATGCGTGGAAAATTGCTCACGGTGTTCTTTATACCATGGACCGTGTTAACAACGCTGGTCGTCAGCTTGACCCTTTATGTTTTTGTAGCCACGCCCCGGAAAATCTTACtcatcttttttttcattgcaATTTTATTCAATCCTTACTGCTATGGGCTCAGTCTATGTTTCTCAGGGTTACTCCTCTTTCTCCCAGTCTGCAGCCCCGTCACATTCTTTTTGGGTATGATCATGATGAGAGACAGATAGTGCCCCCGGTCTTCTTTTATCTGCTGTCTCTCATCAAATATTTTGTCTGGCTTGCCCGAAATGATTATCGCTTCAATTCTGTTCCACCTAGTCATGATCATGTTCGTTCTTCCGTTATTGCTCGACTAAATGTTCATCTTCTCTCCTTTTCCAAACGCTTCCGCTCTCCCAGCAAACGTCGATTTTTCAACCGCTCTTGGAACGTGCTGGGCAAGTTCTCTCCTGATATTGAAACAATcactttctaa

Transcript

ENSQPTT00000028614

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14381	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000039 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13966 all species →	zf-RVT	zinc-binding in reverse transcriptase	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR052343 all species →	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR026960 all species →	Domain	Reverse transcriptase zinc-binding domain	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46890 all species →	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSQPTP00000023337.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000023337.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.