Gene detail

Detailed information of ENSQPTP00000023726.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552660.1, Bardet-Biedl syndrome 4 protein-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000029064

TAGCCTTTTTATGAACAAATTGTTAATTTAAATATCCCTCTCAGTACATTAGTGACTATAAAGAGCTATAGGGCGTTCATATGGCTTCCACAAGCAGTTTACAGTCTGAAGGGAGTCATTCAGTGAGGTCGCCTACAGGAACCGACAGTCCATCTGATGCAGGTTCTAGTCCTGATGGTTCTGTAACTTCTGTAAAATCCCCAACTTCTCCTAAGCCACTGAATGGTGCTGCTGTCCCTGATGCTCCTTCAAAACAACCGCCAGCTAAAAGAAGCGAGGCGCCGAAGCGAAGAGGAAAAGTTCCTGATCTCCCTGTGTTTGAGAGGCGAAACTGGTTAATCCATATGCATTATGTGAGGAAGGAGTTTGATAAGTGTAAGGTTCTAATCAAGGAACAGCTTTTTGAGACACAATACATGTGTGAATATGCTTTGTATGCTCAAgCCTTGATTCTTCGTCAAGAGGGTAAAATCCAGGAATCACTGGATTTGTTCCAACAAACAGTAAAAATTAACCCCTTTAATGCTGATAACCTTAAGCAAGTGGCAAGATCTCTATTTCTTCTTGCAAGACACAAAGCTGCCTTGGAAGTGTATAATGAAGCAGCAAaactgagctccaaggattgGGAAATTTACCACAATCAAGGGGTTTGTTATCTCTATTTAAAAGATTTTGAGAAGGCAAAGGATTGTCTGAAGCATGCCATTCAATACCATCGGCATGATGCCTCTTTCCTTCAGCTGGGCAAGATCTACCTGATGGAGGGAGACATTGAATCAGCTATTGACACTTACAAGAAAGCCATTGAATTTTCTCCAGAAAACCCAGACTTGATGACCACTCTTGGGTTACTTTACCTCCAGATTGGAATGACTCAAAGAGCTTTTGAATATCTAGGGAATGCAATGACATACGATCCAAGTCATGTCAAGgcAATACTTGGTGCAGGATCTATGATACAAACCCATGGTGATTTTGATGTTGCTCTCACTAAATATCGTATTGCTGCATCCAAGATACCTGAATCACCTCACATGTGGAACAATATTGGAATGTGTTTCTTTGGCAAGAAAAAATATGTTGCGgCCATCAGTTGCCTTAAAAGAGCTGCTTATATGGCACCATTTGAATGGATCATTATCTACAATTTGGGTTTAATACACCTGACAATGCAACAATATGCTTCCGCATTTCATTTCCTGAGTGCAGCTATTACGCTAAAACCTAAACATGGACAGCTCTTCCAGCTCCTGGCTATCGCATTGACCCATCTCGATGACCATGACAATGCTAAACAAGCCTACGAACAAGCCATTATGCTAGACATtgaTGATCCAGCAATAAGTCTGAACTATGCTATCTTCTTGTACAACATGGAAGACCGAAAACAGGCGTCAAGACACTTTGCTGCTTacgagaaaaaaatggaagTCTTCAGGAAAACTAAAGGGGGCGATATTGAAAGAGAGATCCTGGAGACAGGCAATCGTCTTGGTCCTGCTTTACAAGTCGGCGAGAAACTGGTGTGGGATGCTGAAGCCAAAACCACTCGCATACCATCATCCAAGGCACAGAATGACAAAAATAATTCTTCCCCTGCCACGTCAGCTAGCAGTAGTGCTGCTACGCTTCCAGAGGACGGTTCCTTTGTTTGAATATATTGTACAAATAGCTAGAACTTTCttgtaaaatatatctttTCCGAATTCGCTTGAGTTACCAAGATGGCTACAAGTCGAGGTTGGAAGTCTAACTCGACTAGGAGCCACTGATTTGTGGTTTATTGATCTTACTCACATTTTATTCATCTAGAGCAGGTTTgaagtgaaaaaccaaatctCATaaccagagcctgcgtttcttcttgcctgcggcgaagaacgagggctctggcataatccattttttgagaccaggatttcttggactccGGGTAAGAGCGCATACGttaaaagacttgccaaaaataaaaataatatgttCCCCATTTCTAATTCTTATTTTGATCGAAAGTAAACACAgaactctgtttgaaagcaGGTTTGAAAGCAtaattttcattcattatatttcactttcggaaaactgcgcatgcgccaaaaaatTTCCTTTCGGTAAGACTAATCGGCTTCATGATTCGTCGATAGGGTGTTTGGGCATAATGATTTTCTTACTTCCGGCGTACTCTCTTGCAAAATACGTAACGCGCCTTCTCATAAAATACTGTATGTATGTACTCGTGTGTATTTGATacaaagaagagataactagaaTGATTTTCACatgaccgtgaaagaaaatagaccattaagtttgtaatagttgataaagaacaaaaaaaaatcattggtttagagtctactactaactattagtttgcctattctttcacgatcatatgaaaatcactctagctAAAatctagtgtgagctgcgtcggtgtttctaatgaaacagtaatgataaaag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96RK4	BBSome complex member BBS4 OS=Homo sapiens OX=9606 GN=BBS4 PE=1 SV=2
Q1JQ97	BBSome complex member BBS4 OS=Bos taurus OX=9913 GN=BBS4 PE=1 SV=1
Q8C1Z7	BBSome complex member BBS4 OS=Mus musculus OX=10090 GN=Bbs4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006804 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07719 all species →	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan
PF13432 all species →	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13414 all species →	TPR_11	TPR repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR013105 all species →	Repeat	Tetratricopeptide repeat 2	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44186 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0036064 all species →	Cellular Component	ciliary basal body	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0061512 all species →	Biological Process	protein localization to cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16531	BBS4; Bardet-Biedl syndrome 4 protein	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.