Gene detail

Detailed information of ENSQPTP00000025191.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031561192.1, F-box only protein 3-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000030766

TATTAGACTCGACTCTTGCAGTGCTCAAACTTGAGTCAGTTTAATCTAAAGACTTCttcaaaattgttttcttttccggTTTCTGCTTATTTCTTATACATCTTTAAATATAAGAGAGTGTGATTGGGGTTGAACGGTTAACTATCAATTGCCCTAAAAATTGGTAGTTGCCTAGCCCGGGTGCCTAGTCTGCGTGGTCAGAGGCTCTCCCGCTCCTCCctttccccctcccctcccccctccttcCGAAAAGCGAGCGAAGAGCCTGACCACGCAGGCTAGTAGTTGCCCCAACCGCAATGTATCATGGGAATGTGAAAATAGTGGTATTGGGCTTGCTGTGTGTTTGTTGGAGTTCAAAAAAGCCTGGTACCTTAGTAAACATGGCGGACGAGTGGTTGGATGAAGAGATTGGATTGGGTTCTCTTCCTGCTATCCCTCTCGCAAATATTCTCTCTTACCTAAACCAAAAAGATTTATCACGATGCTGTTGTATTAGTCGGAACTTTAGCGAAATAGGGTCTTCTATCTCTTCGTGGAAAATCTGGTGTGAAACCGTTTGGTTGTTGGATGTGAGTGATCCTCTGCCCAACAAGGAATGGAAGGATGTTTACATctcacaaaataaaaaatggggcAAATACATCTGCTGTTACACTGCTATAAAAAAGGCTTGGAACCAGATTGAAGAGTTTACTAAAGCCAACTGTCCCGACATCTATGCATCTCTTAACCCAGGACTATCAGACGAAGAACTGGACAGAATCACAAAACGTCATTTGGAAGGGCTCACACTTCCACTTGATGTTCAGTGCTCATATCGAATTCACAATGGTCAGAGGCTAGTGAGTCCAGGGCTAATAGGATCTATGGCTATATCTAACCATTATCAAAGTGAATCATTGCTTGATTTAAGTGTGGCATCCAGTGGACTGCAACACAGAGAAGGACTTCAAAATTGTTTACTATTGTCCTTATGTATTTACACTGGTAATGGGCAGTTTATTGCTCTTACTGATGAAGAAGGTCATACACCAGGAGAGATCTTCTGGCCAAGTCCTGATAGAAGCATTATTACAGATAGTGATGAAATTGCTAGTGTGAAAATGCACAAGTTTCATAGTGCTTGTTCCTTTACAGACTGGATAACAGAATATGCGGAAAGACTCTCTCAAAATTACTACCCTGTCAtcaataaagaaatatttaaatttgagTATGCAGCATCAGCAACTACCAAAGGGATTACTGTCAAGACAGCTACAGCATTCTTACCAGAACTGAGCAGTGTTCATCcacctttgtttttctttacttaCCGTATTTCAATTTCCATGGACAAAGATCAGTGTTCTGTGAGTAATAAATGTCAGCTAACAACAAGGCATTGGTACATTACTGATGGAGATGGTGAAAAGACTGAAGTTCATGGTGCAGGAGTAGTAGGACAACATCCAACCATGCAGCCAGGAGCTACACATGAGTATGTAAGCTGTACGACATTCCAAACACCAACAGGCACCATGGAAGGATATTATGTCTTTAAATATTGCTCTTTAAGTAAAGGAAATGACACGTTTTGTGTTAAGATTCCTGCTATGCATTTTAAAAGCCTTCCATACATAGAGGCAGATGTACGATTGAATAAAATAGGAAGAAAAcatgatgaaaaataaataaaaacacttAACTGGTTATCCTTGACTTGGCATCTCATGGATAAAGGCATTTGATTGAGGCTGTATGGAGAAGCATGTCTTTAAACTTACTTAGCAGGCTTTCACTCATTAGCAAATGGAGGGAAGGGATTGACAAAATAACATAACGCAACCTTCCCTGCATGGTAAAGGCAACAATTGCGTAACTCCTCCTTTCATAATCCTGCAATAGTTCTTAACCCTCCTCAAATATGTGATAACAGAAGTTAAATATTGAATTAGTTTGTTACTAACACATTCAGAAATTAAAAGGGGGTTTCCAAATTGACCATTGCACTGCACTAATGAAAGGGGAGTTCCATGGAACCACCTCTAAATCTGCCACCCAAGCCCAAATAAATCAATATCTTCTCATAGTTAGtgtttatagtacactcaacaaaattactcaactctgattggtcgagaagagtacaattatagccttaattgtactccgtaggagtaccgaattaagtcactatggcaacacggccaaaacaatgtcaaaacaataaattattttctatcattttttacttaaaacatgtaaataaaattttaaagccataagaactaatcttttttatgcatttcagttgctcaatggactgaaaatcggccaccaaacagacaaagatgaacggcgtcgcttcgcattttttactgaaattttgttgagtgaactataaacaaaaaatcacacaTCTTCTTATACAATAATGTTTTGACAGTTCTTTAATTAAGTAAGAAGGACAAATTAACATGACTAAAATAATAGGATTTATGCTGGCttggaaaaaatatctatttataaattcttaaaaaatacaaacatgCTATATAACATGCTATATAACAAACTTTAATGAAAATGTCATAATTGGAGTGTGAtatgtaatttttgtttttatcacacagtctaaataataattatgagaTTTTTGTGGGGTTACATTATTTTAATGTAATACAGTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6H7H7	F-box only protein 3 OS=Bos taurus OX=9913 GN=FBXO3 PE=2 SV=1
Q9UK99	F-box only protein 3 OS=Homo sapiens OX=9606 GN=FBXO3 PE=1 SV=3
D4ABP9	F-box only protein 3 OS=Rattus norvegicus OX=10116 GN=Fbxo3 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009863 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00646 all species →	F-box	F-box domain	Domain	Interproscan
PF04379 all species →	DUF525	ApaG domain	Family	Interproscan
PF09346 all species →	SMI1_KNR4	SMI1 / KNR4 family (SUKH-1)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052121 all species →	Family	F-box Protein Family Substrate Recognition Components	Interproscan
IPR007474 all species →	Domain	ApaG domain	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR018958 all species →	Domain	Knr4/Smi1-like domain	Interproscan
IPR036767 all species →	Homologous_superfamily	ApaG domain superfamily	Interproscan
IPR037883 all species →	Homologous_superfamily	Knr4/Smi1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46550 all species →	F-BOX ONLY PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10290	FBXO3; F-box protein 3	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.