Gene detail

Detailed information of ENSQPTP00000025203.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031555104.1, choline-phosphate cytidylyltransferase A-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000030780

CAACGCGTGAGTTTATAATACGAAGTTCAATGTTTATCGGCAGGTATTCCTTCAATACCCTCAAAAATACAGCctaaaaacactcaaaaatgTCCTCTCCTAAAGCAGCAAAGGCCGATAATACAACAAGGAAGCGTAAGAGGAAGAGTTCTTCAAGTGAAAGTGAAGAAAATGGCTCTTCAAAGAGAAAACAAAGGCCTCTGGCTCCCCGTGAACCAGCCGTGTATTTCGACCCAGAGAATAACTCATCCGATTTGGAGGACATTGAACCAATTTCTTTCGAAGATGCAAAAAATGGAAAAGctACAAGACCGATTCGAGTCTATGCTGATGGTATTTATGATTTGTTCCATTTTGGGCATGCAAGAGCTTTGATGCAAGCAAAATTATGTTTCCCAACACCAGTTTACCTAATGGTTGGAGTTTGCAGTGATGAACTGACACACAAGTTCAAGGGTTTCACTGTTATGACAGATGAAGAAAGATATCAATCATTACTCCACAGTCGATATGTTGACGAGGTGATTAAGGACGCCCCATGGTTGATAAGCAAGGAGTTTTTAGATTTACACAagATAGACTTTGTTGCCCATGATGACTTCCCTTACAAAAGTGCCGGCGCAGAAGATGTCTATAAAGACATCAAAGCCATGGGCAAGTTTGTTGCAACCCAGCGTACAGAAGGAATATCTACTTCTGATATCATTGCTCGTGTCGTAAAGGATTACGATGTGTATTTAAGGAGAAACTTAGCCAGAGGGTATACTGCAAAGGAACTGAATGTTGGATTCATGAAGgaaaaagaagTTTTAGTTAGAAACAAATTTGATGACATCAAGGGAAAGATAACAGACAAATCCCAAGAGCttcttgaaaaatgggaagAAAAATCAAGGGACTTTATCAGCCGTTTCATTGATATCTTCGGCAGGGATGGCCATCTGGACCGTCTTATTGGAAAGGGAAAGGACAAGATAGTAGGAGCTGGAAGGAGAATCAAACATGCACTGTCACCCAACCCTTATGCTGACCCTGAATACTATGAAGAAGTGTCCCCATCCAGATTACCTGCAAAACAACCTAGATTATCCTTTGAGCCTGAGATGTCAGATGATTCAGAATCAGAAGTATATTGAAgagttaaaaaatattgatgcAAATTGCAATACTGCTATGCTTTTTTCAATAAGGTTGGTGACGATTTTGTTGCATTTTACACGCATTTCAGACTTGGTAGGCAACATGCGACAAAAACTTCACAACGTTTAGCTTCATCATATTTTAATCTAAGTTTTGCAGTCAAAGGACAGGAAGCTTGCCCCCTAGTACTGCATCATTCAATTCATTATTATCCACTGATGATAGCCAGGTGAAATGTAGTCCAGCTTGATTAGCTAATCTTGCTGTCTTGTCCTCTCAAATGCGTCATACAGTTCAAGATTGGAATAATACATTAAAGGAagtttaaaaattgaaaaatcaaaTGATGAATTGAATAATGCAGTCTTGAGGAAGCAGAAGGCATACTTCTTGTACTTTGAgtgtaaatgtttgaaatTATCACTGACAAGATATTGTCCATGTTTGGACGTTTTCAGAAGGGATGACAAATAATCCTTCATTGAATAATTTAAGTGTctcattttaaaaacatattcCTGGAAAATTAATCAATGATTCTTGTACATTCACTTTTTTGGTATTCTAATGTAGGGCCAGAAATAACTGCCCGTTAGTCGCCAATCATGATGACCAGCTAAATTGATTTTTACTTGGCCATTCTTCATTTCTGGCTCAATGTtacctgctagcagagtctctctcctctttctctcccttctttcaggcggggaggaaggagactctgccgatgtagagcATTTCCTTTGATACACTACTGTCCATGATTGTGGATgaacaaaaccagttttaaaaccggtttttaactgattacatgtagtgcgcatgagAAAATGTGATACACCGTGGCGCCAAACATTGTTTGACGAGAGCGACTGTCTAAATCATGGcagcgttgctaagttacgccaCGCATGCACTACAGAAATAACGTCCTACATTGGCAGAGTCAAATTTTCTCTCTCAGCCAAAACAACAAAGGAAAATAGcttctg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P19836	Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2
P49586	Choline-phosphate cytidylyltransferase A OS=Mus musculus OX=10090 GN=Pcyt1a PE=1 SV=1
P49585	Choline-phosphate cytidylyltransferase A OS=Homo sapiens OX=9606 GN=PCYT1A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006924 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01467 all species →	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041723 all species →	Domain	CTP:phosphocholine cytidylyltransferase domain	Interproscan
IPR045049 all species →	Family	Choline-phosphate cytidylyltransferase Pcy1-like	Interproscan
IPR004821 all species →	Domain	Cytidyltransferase-like domain	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10739 all species →	CYTIDYLYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004105 all species →	Molecular Function	choline-phosphate cytidylyltransferase activity	Interproscan
GO:0006657 all species →	Biological Process	CDP-choline pathway	Interproscan
GO:0031210 all species →	Molecular Function	phosphatidylcholine binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00968	PCYT1; choline-phosphate cytidylyltransferase	EC:2.7.7.15	Choline metabolism in cancer	ko05231	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.