Gene detail

Detailed information of ENSQPTP00000025231.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031566319.1, succinate-semialdehyde dehydrogenase, mitochondrial-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000030813

ACGCCGTGCATTTGGGGTTATGAGGTTTTATAGACATGCGATTGATTGTGTAATAATATCGGCCTTATGTCAAGATACCATGCAAGAGTAATGGCGCTGCTTCGAAGTGAGTTCCCTCTCCTCAAAGACAAGGGCTACATTGGAGGCAAATGGATTGGAACTGAGAAAACGTTCCCCGTTTACGATCCTGCGACTGGACAAGAACTTGGACAAGTGGCAGACATGGGCCAGAAGGAAGCAGACTTAGCCGTTAAAGAAGCTCATAAAGCGTTCCAAACCTGGAAGAAAACCACAGCGAAGGAGCGTAGTGTGATGCTGAAGAAGTGGAATGACCTCATTCTTCAAAATCAAGAGCAGTTAGCCAAGCTTCTGACTTCAGAGCAGGGCAAACCACTGGCTGAAGCCCAAGGTGAAGTCAAATACTGTGCATCATTTGCTGAATGGTTTGGTGAGGAGGCCAAGAGGGTGTATGGTGAGATCATTCCATCACCAATACGTGGTCGTAAACTATTAGTGCTAAGACAGCCCATTGGTGTAGCAGCACTTTGGACACCAtgGAACTTCCCTCTTGGAATGATAACCAGAAAAGCAGCTGCAGCACTTGCCGCAGGGTGTACTGTGATCATTAAACCATCTGAAGAGACCCCTTACTGTGCATTAGCCTTGCAGCAACTTGCTGAAGAAGCAGGGTTCCCACCAGGCGTCATCAACACATTGACATGTTCTAGGGATCAAGTTAACATTGTAACAGATGCTGTACTCCAAAGTGACCTGGTCTCAAAGATGTCATTCACTGGTTCAACAACTACTGGCAAGATTTTAATGGCCAAAAGTGTAGACACTGTGAAGAAAATGTCCCTTGAGCTAGGTGGCAATGCTGCTTTCATTGTCTTCAACTCAGCTAACATAGAACAAGCTGTTCAAGGTGCAATGTCTAGTAAATATCGACATACAGCCCAGACTTGCATTTGCTCTAACCGCATTCTCGTGCAAGATGAAATCTATGATGAATTTGCAAAGCGCTTAGCAGAGGCTGTGGACAAAGAACTGAGGGTTGGTAATGGCATGGACAAGAACTCCACTCAAGGACCTCTCATCAATGAACTTGGTGTACAGAAGGTTGAGAGGCATGTTTCTGATGCACTGTCAAAAGGTGCCACATTATTGCGTGGAGGACATCGTCATGCATGTGGAAAAAACTTCTTTGAGCCAACAATCCTTACTGAGGTTAACACTGACATGTTGATTTGCAAAGAAGAAACATTTGGTCCGGTTGCACCCCTGATTAGATTTAAGACTGAGGAAGAGGCATTGGCCATTGCAAACTCCACAAACACAGGGCTTGCTAGTTATTTCTACTCCCAAGATTACAGTCAAATCTGGCGTGTATCCGAAGCCATGGAAGCAGGAATGGTTGGCGTCAATGAAGGGCTCATTTCCAATGAAGTCATCCCCTTTGGTGGATGGAAGCAATCTGGGCTTGGTCGGGAAGGTTCCAAGTATGGAATAGAAGAATACATAGAAATGAAGTATGTCTGCATGGGTGGAATCAATGAGTAATGATCAAATTAGGTGAATTGTCTAGTGTCTGTTGTAGGTAGGTACaatatagtacaaaatagtgaattttttaaaatgcttcTATGTGATGTTCTCTCTTGCTCAGTGCTATCCAGCTCGATTAGTTCTGTTTTCATCATGAGAACCAGTATGGCTAATGAATAGTATGaaatattctttagaaatgtGTACATTATTTCTGTTATACAACTATACATTCCTAAGAAAATCAAACAGTGATATGGTGGTAGTCATGGTTAAGGGACTTCttcaaaaaattctttttttcaaaaacaataccAAAATAACAGCAAAGATAAATATTAGAAATTATCAGCCAGTTTAAGAGCAAGAGAATTACAACCGGGAAAAGGAAAAACGATGCAATTCTGTGAGTTTTGAAAGTGTGATTATtgttactttttaaaaataaaatagttaaGGTTTCTGCTGTGAAGGTTATGAAATATGGGTTTGAAAAGACTTCTTTCCATTTGGCatattgttttcccatttcagaccatgtgtcattccctttagtatcattcatttctttgtttaatggttgcacttCAGACCTTGCCATTCCcttgattattatttctttgtttaattgtTGCACTTGAGAAGATACATGAACTGGGTAAAACACAATGTTTTCTAATattagaccatgtgtcattcacTTGAGTGTCATTTGTTTGTCTAATGGTTGCACttaagaagacacatgaacatGGATGCAACTCAATGTTTTCTAATTTTCTACCATTTGTCATTcacttgag

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P51650	Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh5a1 PE=1 SV=2
P51649	Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=ALDH5A1 PE=1 SV=2
Q6A2H1	Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=ALDH5A1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000397 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016163 all species →	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR050740 all species →	Family	Aldehyde Dehydrogenase Superfamily	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR029510 all species →	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR010102 all species →	Family	Succinate semialdehyde dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43353 all species →	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016620 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0004777 all species →	Molecular Function	succinate-semialdehyde dehydrogenase (NAD+) activity	Interproscan
GO:0006807 all species →	Biological Process	obsolete nitrogen compound metabolic process	Interproscan
GO:0009450 all species →	Biological Process	gamma-aminobutyric acid catabolic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0009013 all species →	Molecular Function	succinate-semialdehyde dehydrogenase [NAD(P)+] activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00139	ALDH5A1; succinate-semialdehyde dehydrogenase	EC:1.2.1.24	Alanine, aspartate and glutamate metabolism	ko00250	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.