Detailed information of ENSQPTP00000026787.1 in Actinia mediterranea

Genomic Location: chr5:11200455...11208296
NR annotation: XP_031558275.1, rRNA methyltransferase 1, mitochondrial-like isoform X1 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for ENSQPTP00000026787.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99J25rRNA methyltransferase 1, mitochondrial OS=Mus musculus OX=10090 GN=Mrm1 PE=2 SV=2
Q6IN84rRNA methyltransferase 1, mitochondrial OS=Homo sapiens OX=9606 GN=MRM1 PE=1 SV=1
O94631rRNA methyltransferase 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrm1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010305 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00588
all species →		SpoU_methylaseSpoU rRNA Methylase familyFamilyInterproscan
PF08032
all species →		SpoU_sub_bindRNA 2'-O ribose methyltransferase substrate bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047261
all species →		DomainrRNA methyltransferase 1, methyltransferase domainInterproscan
IPR029064
all species →		Homologous_superfamilyRibosomal protein eL30-like superfamilyInterproscan
IPR001537
all species →		DomaintRNA/rRNA methyltransferase, SpoU typeInterproscan
IPR013123
all species →		DomainRNA 2-O ribose methyltransferase, substrate bindingInterproscan
IPR047182
all species →		FamilyrRNA methyltransferase 1, mitochondrialInterproscan
IPR029028
all species →		Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR029026
all species →		Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46103
all species →		RRNA METHYLTRANSFERASE 1, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0008173
all species →		Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0000154
all species →		Biological ProcessrRNA modificationInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0016435
all species →		Molecular FunctionrRNA (guanine) methyltransferase activityInterproscan
GO:0031167
all species →		Biological ProcessrRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSQPTP00000026787.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP