Gene detail

Detailed information of ENSQPTP00000026957.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031564705.1, RCC1 and BTB domain-containing protein 1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000032984

TATACATGATGATCTAAAGAAGGAGgtgattatatatttatatgaaGTATATACCATAAATGAATTCCCTATAATGTTTATAAACAGCCTGCCTTCTAGACATCGAGAATACCTAAGGTTAAATAGCTAAGATAACTTTACTAACAGTATATGAGCAGAATATCCAAGCATGTCAGATTTCATAAGATGGCCAATATTCAGTCTCTTACCAGAAGAGTTTCTTTGTTCTATCAAGACTGCATTAGTATTTGGTAACTCTGGCAATGAAGCTATCTTGGTTACTCATGATGATGAAGTGTTTGGTATAGGATCAAATCTTAGTAGCTGTCTTGGCATGGGAGATCAACAAAACTGTCTACTACCAAGAAAAGTAGAAACACTTTGTCATAAAAAACTTTGTGATTTATCTTTTGGATCTGGTCCTCATGTGCTAGCTTTGACAGAAACAGGAGAAGTGTATGCATGGGGCCATAATGGCTATTGTCAAATTGGAAATGGCAACACAAGCCAGAATCCTGTTTTTATTCCCACAATCCTTCCAGTTTTACAAGGCAGAGTAATAACCCAAATTGCCTGTGGAAGTCACCATTCTTTAGCTCTAACTTCAGAAGGAGAGGTATATGCTTGGGGATATAATAACTGTGGGCAAATTGGCTCAGGTTCAATGACCAACCAAAGCAGCCCAAGAAAAGTTGCCTCAGCTTTAAATAACAGGAAGATTGTTTCAGTTGTTTGTGGTCAGACCTCATCTATGGCACTTTCTGATACAGGAGAGATCTTTGCCTGGGGTTACAATGGTAATGGTCAACTAGGTGTTGGTAATAACACTAACCAGCCTTGTCCATATAAAGTTACTGGCCTTGGAGGCATATTCATGGTCAAGATAGCATGTGGATATGCGCACGCATTAGGCCTTAGTGACTCTGGCTTACTGTTTGCCTGGGGAGCCAACTCATATGGTCAGTTAGGAACGGGAAATAAAAACCATCTTGTTAAACCCATGGAGATCGCTAGTGACAAAGGAAGATTTATAGATATTGCTGCAAGTCCCTCAAGTCACATTTCTGTTGCTTGCATAGCCAATGGCAAACTGTACATGTGGGGACACTGCCGAGGTCAAGCGGTTACTACTCCGACAGAAACAAACTTTACCAAGATGAACGAAGTCTTTGCTTGTTTTTCTTCGCCACCATTGATGCATAAACCTTTAGTCATTGAACGCGAGGATACACGAACAGTAGGCAAGTGTGTAGGTGAAGCATTCAACGACCAAGAAACAAGTGACCTGACTTTCATGATCGAAGGAAAACCAGTCTATGTTCACAAGGCTGTACTAAAAATAAGATGTGAACATTTTCGCACCATGTTTCAGTCGCATTGGGGAGAAGATGAAAAAGATGTCATCGAGATCACCCAGTTTTCATTCGTCGTTTATGAGGCGTTTCTGAAGTATTTGTATACAGACAAAGTAGAACTGATACCAGAAGATGCCATAGggttgttAGATTTAGCCAACTCTTACTGCGAGGAtcagttaaaaaaattatgcGAGCGAATAATCAAAGAAGGAATCACGGTAGACAACGCTGCCATGCTGATGGCTGCTGCCATTAAATACGAAGCAAAGaaATTGGAAGAGTTTTGTTTCCAGTTTTGTGTAAACCATTTGACTGTAGTATCGCAGACAGACGCGTTTGCTCACTTAGATGAAGCAACATTAAAGGGTTTTGTTCAGAAAGCTGGTCAACGTGGGGCTTTTAAGTACTGATAGCCTTTGAATCAAAATTCGTTTTCAtcccttcttttgtttatcagCACCGATCTCCTGTAAGATCGAACCAGAAGAGACAAAGAACAAGAAGTAATATGTATTATCAATATATGATcatcaatgaaatatctatttttctttcttactaAAAAGTGATATCTTGACATGTGAACATAACATCATTGGTAAGAAATCTTAGGGAATCGCACAGCTAAAAGTAAAAATCCACTAAAATTATATATCATCAATAATAGGACTTtggcatgatggcgtcatttgactcccactaccaagatacttcgcgaattttctttctcatttaaatttgtattccctcatgagaatagtaagacaattggtgctaattaactgaacaaaagaaagtgtgcaagggagtctggtagtagaggtcaatgacgccatcgtgcaaacgtcctattataGTTAAACCGaaaatattacatggccgcttgaaGATGCAGATTTTATCTCCTCGTGTTGAGAATATCTTACTCGTTCTCTGCGCTCACTTCAAAGATATCACCTCAACACCCGAAGATGAGATccgtttattatatagatatcgatgaaatatcAGGATTTATCCAGATATAATATCcgtcacgtgtgaagatatcaccGTTACCATGACTACGTTCTTATCAAGGAATCACATTTAGGCCTTCGCGGTTTCTTTCAATCCTCAGATCAATGAAATGTCAGCTCCATCGCCGGCAAACGAGAATTTTGATGATATCTTCATTGACCTGTTTCctcatttttttgaaatgcaAGAACAAAGACGGGAAAAGAATACAAACTGTCCTCGCTTTGTGGTATTTTGTCGAGTTTTGAACGCCATATTTCATGATTACGGTAAatccatttttaaagattgtAAATTCTAAGAGTTCTCATATATTTTTCTCGTTTGTATTTAGCGAGGTTAATTCAAGACAGTGATTTTTCAAGAACCTGTTGTATCATTGAACTGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8NDN9	RCC1 and BTB domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RCBTB1 PE=1 SV=1
Q6NXM2	RCC1 and BTB domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rcbtb1 PE=1 SV=1
Q99LJ7	RCC1 and BTB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rcbtb2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007908 (this species only)
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR051625 all species →	Family	Diverse Signaling and Regulatory Domain-Containing Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22872 all species →	BTK-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11494	RCBTB; RCC1 and BTB domain-containing protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.