Gene detail

Detailed information of ENSQPTP00000028631.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031550981.1, neural cell adhesion molecule 2-like, partial [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000035107

atggAAAGTATTTTAATTAGTAGACTGCTCATTCTTTGTGTTCTGTTTTCGTTTCCTCTGGTGGAAAGTGACATAAGAAGTCCAAGCCCTATGATACGAAATGTTGGTCAAGATGCTTTCTTCATGTGGAACTCAACCAATGGACATCGCATATTTGAAGCGAGTTGGGGACTGTTATACGATGGACTTGTTAAACCACAGTTTATCTACGTAGACAGATCAAATAATGTTGTGCTTAGCACGGCTTTGGACAAAGGTGCTTTACGTTACAAAGGAAGAGTCCACTGGTTTGGTGATATCAATTCAGGACACGTTTGGTTCAAACTAACGAATGTTACTCTCAACGACACCAATCAGTATGTTGCAGGGATTGTTGAAGAAGGGAAACCAAACACCATATATTCGGCACAATTAACTACCGCAGCTACTCCCCAGTTTGTTAAACGACCACCTCTAAGTAAGGGTATAGAAGAAGGTCAGGATCTAGTTATAAAATGTACTGCTATTGGTCCACCGACACCTAAAATCACGTGGGTACAGAGAGAAAGTCAAGTCAGCATGAGTACAGGAATGGGAAGTGCTATATTGAGGATAGCAAACATTAGAAGATACCAGAATGGGACGTATGAGTGTCAGGCGAGGAACAACCCGAATAAGAGACTGGTCACTGCACAAACTGTTGTGACTGTCTATTTCAAACCAACTGTTAATGAGTCTTATTCGACTTCAAAATCCAAATCATGGAATGGCAACAGTATTCATCTCAGATGTTTTGCAACTGGTTTACCTTCACCACGAATATCATGGTACAAACCAACAAATCAACAGATCACTACAGGTGTCATCATTGTACCCGGGGGTAGTGAGGTGACAGTACTGACAGCTACTGACCAAGCGGACTATGGACAGTACAAGTGTCGAGCAACAAACATCCTGGGAAGTGATGAACATGTTATAAATGTTACTAAGCTGATTTCCCCAGGTCCTGTTTCTTTAACAATAACGGATGTCGAAGCATCATCCATAAATGTTACGTGGTACAAAcctgctgatgatggtggacTCGATGTCACTGGTTACTTAGTGGAAGTCAGTACCAAGCCCCCAGTGATCACAGTGAAAACCCATGATGTTATAACAGGACTGAAAGCAAACACACTCTACGCGGTCAAAGTGTATGCCAAGAATATTGTTGGATATGGAGTGGAGTCTTCCAAAATTATCAGAACACAAAAAATAGGTAAGCCATCAGCTCCAGAGCTAGTGATAGCTCTTCTTGAACGGTCACCAGAGTTCAAACTCTCAGTCCTCTTGAGATGGGAAGAGCCGGATGACAATGGCGGCAACATATCAAGGTACACAATCTACGTGAAGGAAGTCGCGAAAAAGGCTGAGTGGACAAAGTATGATAACGTTATTGATTCAAAACAGCTTgagtataaaataacaaaggaTATTGTTTATGGCAAAACATACATGTTTATGGTAACTGCATGGAACAAATATGGAGAAAGTGTGAAGGATGAAGGAGGTGCCAAGAGGGTAAATACTACAGCAGACAAGGCAACGGCTACTAATGCAATTAAGTACTGCATTGAAAAAGGATCAAAAACTTGTTCGACAGTCCTTGGAGTCGTTATTGCCATTCTAGTTCTATCTATTGGTTTCAACTTACTACAATTTGTGTATCTAAAAAGAAGAGTACAACTGAAcaGTAGAAAACAAAGCCCAACCCAAAAGAGaAAACCTCGGTCAAAGAAAGTTGCTTCTGAAGAAACCTACGAGaatGATCCTGAATTGGAAGATAATCCAGCATCATTGGATAAAGCATCTCGTGCACAACAGCCTGTTCAAAGTGGATCAGAATATGAAACCATCCATAAACTAAATCCTAACAAGGCAGCCTCGTCTTATGATGCCAGTAATTATCAAGGACTCAATTTGATGCCAAACACGTCTAATCAAGGGACATGTGGACCAGTGTACGAGTCTCTTGGTACAGGATTAGTAGAACCCAGAGTGaaggataatgataatgagCAACACCCATATGAACCATTGAACATTAGAAACCAGACCTCTGTCTATCAATCTCTGCAGACTAAAAGCAGTGAGTCGGCCATATAA

Transcript

ENSQPTT00000035107

AGGCAATGATCGACATATGAATACGTTCTCGCTCTGAAGCAACATAACTTGCTATTCGTAACATATTGatgtcttttatttttatcacatttatcttgattttttttccaaatggAAAGTATTTTAATTAGTAGACTGCTCATTCTTTGTGTTCTGTTTTCGTTTCCTCTGGTGGAAAGTGACATAAGAAGTCCAAGCCCTATGATACGAAATGTTGGTCAAGATGCTTTCTTCATGTGGAACTCAACCAATGGACATCGCATATTTGAAGCGAGTTGGGGACTGTTATACGATGGACTTGTTAAACCACAGTTTATCTACGTAGACAGATCAAATAATGTTGTGCTTAGCACGGCTTTGGACAAAGGTGCTTTACGTTACAAAGGAAGAGTCCACTGGTTTGGTGATATCAATTCAGGACACGTTTGGTTCAAACTAACGAATGTTACTCTCAACGACACCAATCAGTATGTTGCAGGGATTGTTGAAGAAGGGAAACCAAACACCATATATTCGGCACAATTAACTACCGCAGCTACTCCCCAGTTTGTTAAACGACCACCTCTAAGTAAGGGTATAGAAGAAGGTCAGGATCTAGTTATAAAATGTACTGCTATTGGTCCACCGACACCTAAAATCACGTGGGTACAGAGAGAAAGTCAAGTCAGCATGAGTACAGGAATGGGAAGTGCTATATTGAGGATAGCAAACATTAGAAGATACCAGAATGGGACGTATGAGTGTCAGGCGAGGAACAACCCGAATAAGAGACTGGTCACTGCACAAACTGTTGTGACTGTCTATTTCAAACCAACTGTTAATGAGTCTTATTCGACTTCAAAATCCAAATCATGGAATGGCAACAGTATTCATCTCAGATGTTTTGCAACTGGTTTACCTTCACCACGAATATCATGGTACAAACCAACAAATCAACAGATCACTACAGGTGTCATCATTGTACCCGGGGGTAGTGAGGTGACAGTACTGACAGCTACTGACCAAGCGGACTATGGACAGTACAAGTGTCGAGCAACAAACATCCTGGGAAGTGATGAACATGTTATAAATGTTACTAAGCTGATTTCCCCAGGTCCTGTTTCTTTAACAATAACGGATGTCGAAGCATCATCCATAAATGTTACGTGGTACAAAcctgctgatgatggtggacTCGATGTCACTGGTTACTTAGTGGAAGTCAGTACCAAGCCCCCAGTGATCACAGTGAAAACCCATGATGTTATAACAGGACTGAAAGCAAACACACTCTACGCGGTCAAAGTGTATGCCAAGAATATTGTTGGATATGGAGTGGAGTCTTCCAAAATTATCAGAACACAAAAAATAGGTAAGCCATCAGCTCCAGAGCTAGTGATAGCTCTTCTTGAACGGTCACCAGAGTTCAAACTCTCAGTCCTCTTGAGATGGGAAGAGCCGGATGACAATGGCGGCAACATATCAAGGTACACAATCTACGTGAAGGAAGTCGCGAAAAAGGCTGAGTGGACAAAGTATGATAACGTTATTGATTCAAAACAGCTTgagtataaaataacaaaggaTATTGTTTATGGCAAAACATACATGTTTATGGTAACTGCATGGAACAAATATGGAGAAAGTGTGAAGGATGAAGGAGGTGCCAAGAGGGTAAATACTACAGCAGACAAGGCAACGGCTACTAATGCAATTAAGTACTGCATTGAAAAAGGATCAAAAACTTGTTCGACAGTCCTTGGAGTCGTTATTGCCATTCTAGTTCTATCTATTGGTTTCAACTTACTACAATTTGTGTATCTAAAAAGAAGAGTACAACTGAAcaGTAGAAAACAAAGCCCAACCCAAAAGAGaAAACCTCGGTCAAAGAAAGTTGCTTCTGAAGAAACCTACGAGaatGATCCTGAATTGGAAGATAATCCAGCATCATTGGATAAAGCATCTCGTGCACAACAGCCTGTTCAAAGTGGATCAGAATATGAAACCATCCATAAACTAAATCCTAACAAGGCAGCCTCGTCTTATGATGCCAGTAATTATCAAGGACTCAATTTGATGCCAAACACGTCTAATCAAGGGACATGTGGACCAGTGTACGAGTCTCTTGGTACAGGATTAGTAGAACCCAGAGTGaaggataatgataatgagCAACACCCATATGAACCATTGAACATTAGAAACCAGACCTCTGTCTATCAATCTCTGCAGACTAAAAGCAGTGAGTCGGCCATATAAATATGAGAATATCCACGTCATAATCAGTATTAAATTgctatatattataaataataactaCCAAATCATTTTACCTTTAATTACAACTTGAATAAAGGTATTGTTTCTTGATACTTATTTAGTGTTACGTATTAACAAGTTAACAGAGAGAAGATTAAGACAAACTAAACACAGTaataacaaaaacataaaaatgtaAGGTTTCAATATGCCAATATTTATCAGCCAATTTGTCCAGACATTCTGTCTGAAACTTTGTGTGCAACACATGAAGATAGTGGgagcatttgaaaatttgcTCATTTTCACCGGATCAAGATGGAATTTAAAAGAGACATTGACTTGTAGAATACCGAAAACATTACTTTTTCCTACTTGTCTTCATCTCTTTATCTgacaaataaacaataaaacaaacatttaacaAATAATTGATCATAActgtcagccaatcagattgcgaCTAAATACGAGCCCTCCAAACCTATAGTCTTGATAAAAACTACTTCTACATGAAATAGTTTCGTATGAACATAGTTAACATATTAACTATGGTATGAATGATAAGCGTTTGGAAACCTTGAATCTTCGTTATACAATAGATAAATTATATTGACAGTGTCTAAAACTCCTattaggatttttttttttttttttt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VS29	Cell adhesion molecule Dscam2 OS=Drosophila melanogaster OX=7227 GN=Dscam2 PE=2 SV=3
Q8WZ42	Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
A2ASS6	Titin OS=Mus musculus OX=10090 GN=Ttn PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000023 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR050964 all species →	Family	Striated Muscle Structural and Regulatory Protein	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13817 all species →	TITIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06491	NCAM, CD56; neural cell adhesion molecule	-	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.