Gene detail

Detailed information of ENSQPTP00000029546.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031568728.1, histone-lysine N-methyltransferase SETD1B-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

No sequence record for ENSQPTP00000029546.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F3P8	Histone-lysine N-methyltransferase SETD1B OS=Gallus gallus OX=9031 GN=SETD1B PE=2 SV=1
Q8CFT2	Histone-lysine N-methyltransferase SETD1B OS=Mus musculus OX=10090 GN=Setd1b PE=1 SV=2
Q9UPS6	Histone-lysine N-methyltransferase SETD1B OS=Homo sapiens OX=9606 GN=SETD1B PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan
PF11764 all species →	N-SET	COMPASS (Complex proteins associated with Set1p) component N	Domain	Interproscan
PF00856 all species →	SET	SET domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR003616 all species →	Domain	Post-SET domain	Interproscan
IPR024657 all species →	Domain	COMPASS complex Set1 subunit, N-SET domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR044570 all species →	Family	Histone-lysine N-methyltransferase Set1-like	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR037841 all species →	Domain	Histone-lysine N-methyltransferase SETD1A/B-like, SET domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45814 all species →	HISTONE-LYSINE N-METHYLTRANSFERASE SETD1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0042800 all species →	Molecular Function	histone H3K4 methyltransferase activity	Interproscan
GO:0048188 all species →	Cellular Component	Set1C/COMPASS complex	Interproscan
GO:0051568 all species →	Biological Process	obsolete histone H3-K4 methylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11422	SETD1, SET1; [histone H3]-lysine4 N-trimethyltransferase SETD1	EC:2.1.1.354	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.