Gene detail

Detailed information of ENSQPTP00000032607.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031558226.1, mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

No sequence record for ENSQPTP00000032607.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q71F56	Mediator of RNA polymerase II transcription subunit 13-like OS=Homo sapiens OX=9606 GN=MED13L PE=1 SV=1
Q6JPI3	Mediator of RNA polymerase II transcription subunit 13-like OS=Mus musculus OX=10090 GN=Med13l PE=1 SV=2
Q5SWW4	Mediator of RNA polymerase II transcription subunit 13 OS=Mus musculus OX=10090 GN=Med13 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003809 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18296 all species →	MID_MedPIWI	MID domain of medPIWI	Domain	Interproscan
PF06333 all species →	Med13_C	Mediator complex subunit 13 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051139 all species →	Family	Mediator complex subunit 13	Interproscan
IPR041285 all species →	Domain	MID domain of medPIWI	Interproscan
IPR009401 all species →	Domain	Mediator complex subunit Med13, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48249 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15164	MED13; mediator of RNA polymerase II transcription subunit 13	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.