Detailed information of ENSQPTP00000038401.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031563775.1, tRNA:m(4)X modification enzyme TRM13 homolog [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

 Sequence
No sequence record for ENSQPTP00000038401.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BYH3tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus OX=10090 GN=Trmt13 PE=2 SV=1
Q9NUP7tRNA:m(4)X modification enzyme TRM13 homolog OS=Homo sapiens OX=9606 GN=TRMT13 PE=1 SV=2
Q12383tRNA:m(4)X modification enzyme TRM13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRM13 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004197 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05253
all species →		zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan
PF11722
all species →		zf-TRM13_CCCHCCCH zinc finger in TRM13 proteinDomainInterproscan
PF05206
all species →		TRM13Methyltransferase TRM13FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039044
all species →		FamilytRNA:m(4)X modification enzyme Trm13Interproscan
IPR022776
all species →		DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR021721
all species →		DomainZinc finger, CCCH-type, TRM13Interproscan
IPR007871
all species →		DomainMethyltransferase TRM13Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12998
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008175
all species →		Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0106050
all species →		Molecular FunctiontRNA 2'-O-methyltransferase activityInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSQPTP00000038401.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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