Gene detail

Detailed information of ENSQPTP00000040002.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031562096.1, obg-like ATPase 1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000041716

TGtttgtccgccattttgtcagGAGTGGTTTGATCAGCAAAAGGCTATTCGTTCAACCATTTCACGTCTCTTCGGCACTTAAAATGCCTCCTAAAAAGAAAGATACTGCGGAGAAGACGCCTTTAATGGGCCGATTCGGTACCTCTTTAAAATGTGGAATTGTTGGAATCCCTAACGTCGGAAAGTCGactttttttaatgtattgACGAAAAGTGCCGCTTCAGCTGAGAATTTCCCGTTTTGTACAATAGatCCTAATGAAAgtCGAGTAGCTGTACCAGATGAAAGATGGGACTTTCTCTGTGAATATTTCAAACCTGCTAGTAAAGTTCCAGCATTTCTAAATGTTGTGGATATTGCAGGATTGGTCAAGGGTGCTCATGAAGGACAGGGTCTTGGAAATGCCTTTCTCTCACACATCTGGGCCTGTGATGCAATATTTCATTTAGTTCGTGCATTTGAAGGGGATGATGTTACTCATATTGATGGTGAGGTTGATCCTGTCAGAGATTTGGATACTATTTCAGAGGAGCTCAGAAAAAAGGATGAAGAATACCTGAAAGACAAAGTTACAAACATGGAGAAATCATGTCAACGAGGAGGTTCTGCTGCAGACAAAAAGAAAATCCAAGAATTTGAAGTCTTAAAGAAACTCTGTGAATGGGTATCAGAAGAGAAAAAACATATTCGATTTGGACATTGGAATGCTACTGAGATTGAGGTTTTGAACAAGCATTTATTGCTGACGTCAAAACCTGTCATATACCTCGTAAATCTGTCCGAAAAGGATTACAATaggaaaaagaataaattCCTTCCTAAAATCAAGGTGTGGGTGGATGACTATGACAAAGGGGCAGCAATAATCCCATTCAGTGGAGCTCTTGAATCAAAGTTTGTTGACATGAgtgaggaagaaaaagaaagttacTGCAAGGAGCACAACACACAGTCTGCATTAAATAAGATTATCACCACTGGATTCAAAGCTCTTCAACTGGAGTACTTCTTCACAGCCGGAAAAGATGAAGTCAAAGCTTGGACAATATTGAAAGGAACCAAAGCTCCCCAAGCAGCGGGCAAGATCCACACGGACTTCGAGAAGGGATTTATCATGGCGGAAGTTATGAAATTCTCTGATTTTAAAGAACTTGGTTCTGAAGCCGCAGTCAAGGCTGCTGGTAAATACCGTCAAGAAGGCAAAAGTTATGTCGTTCACGATGGAGATATCATCTTCTTCAAATTCAATGCTGGAGCAGGTTTATCAGACAAAAAGAAAGTTAAATAATAAGACCCAGACCCCCACGTCCAAATATCACCACAGGAATCCTGATTTCAAAATCACAAATTCGTTCCTGCTTGAACGACGAAGCTGTAGAAATTTAgctcaaatattttaattaaagTAAAGATATATTTACTTTTCACTAGAAACCGAAATTCGATTCCCATGCTTGGATTGAAAGCTTCGTGAAAAATATAAGCACGAATGCCGAAAATTGTTGCTATTTATCGACAAATTGAAATTAGCCAATcccaaaactttaaaaaatcgtGGTCAAAATTCTACTTTTTGTAACGAAACTGGGTTCGCTTTATCGTAAAATGCGTGATATCCGTTACCAGCTCATAAAGAAATCAGTTTCGGGGATTTTCGGTACAAAATCCGTAACGCGGATTGAGGTTCGCGTAGCGGGGGTAATGGCAAACTGAAGACCATTGTTCCGGCTTTATGTCAGCAGTTTGCGTCGAAATATTAGCGATAACCAAAATACAAATATTCTAATGGTAATGCGGCAAATTCTGCCTCTGTATTCCGACCATCCAAAGATGAAATTCTTCTTTTATTCGATCACCGGGAAAAAACGTATTTTCGTTATTCGGCCAGTCATCGATGAAGCTGACCTCCGTTATTCGACCAGAAAACCGGTCTTTTTATTCGACCACCATCATACTGTCATGCCTGTTATTTGAACCGCCGATAAAGAAATACACCTGTAATTCGACCAGTCTGAGGAAATTAACCTCCGTTAATCGACCATCCAATTAAAAATTCGTCGCCTCCGTAATCCGACCGATTAATGCCTCAATTTTAACCCTTTTTTATTAActaagaaaaaagtaaaatgtgCAAACTTTTTTGTTGCTTTACTTTTGGTAGTTTTTGCTACAGGAACGAAGCAATAGCAACTAAAAGGCCTGTTACACTGTGCAATTTTCCCAGCAACTTGAAGTTTCTGGAGAACTGCAAACTTAAACAAGGGTTATGCgcaatttttgttgttgc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZU42	Obg-like ATPase 1 OS=Danio rerio OX=7955 GN=ola1 PE=2 SV=1
Q5ZM25	Obg-like ATPase 1 OS=Gallus gallus OX=9031 GN=OLA1 PE=2 SV=1
Q9NTK5	Obg-like ATPase 1 OS=Homo sapiens OX=9606 GN=OLA1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003576 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06071 all species →	YchF-GTPase_C	Protein of unknown function (DUF933)	Domain	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031167 all species →	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR004396 all species →	Family	Ribosome-binding ATPase YchF/Obg-like ATPase 1	Interproscan
IPR012675 all species →	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR013029 all species →	Domain	YchF, C-terminal domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR012676 all species →	Homologous_superfamily	TGS-like	Interproscan
IPR004095 all species →	Domain	TGS	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan
IPR023192 all species →	Homologous_superfamily	TGS-like domain superfamily	Interproscan
IPR041706 all species →	Domain	YchF, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23305 all species →	OBG GTPASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19788	OLA1; obg-like ATPase 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.