Gene detail

Detailed information of ENSQPTP00000040324.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031548805.1, transcriptional repressor NF-X1-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000037968

ATGTTAACTGAACAGTTACAAAATGAAAGTTATGAGTGTATGGTGTGCTGTGATAAGATATACTGTAGTGCTGCAGTATGGAGCTGCGATAATTGTTACCACGTCTTCCACTTGAAATGTGCCAGGAAATGGGCAAGGTCTCCTATGGCAGTTATAGAAGgGGAGGATGGTGGCTGGAGATGTCCTGCATGTCAAAACATTAGCCAGTCAGTCCCCAATGTTTACAGATGTTTTTGTGGCAAATCATTAGATCCTCCATGGAATGTCAGGGATGGAATAACACCACATAGCTGTGGAGAGTTATGTAAAAAGAAGCGTGATGCAGCTGACTGTCCACACCTTTGCAATCAATTGTGTCACCCAGGCCCTTGCCCAAGCTGTCCTGTGATGGTATCCAAGTCATGTGAATGTGGAAAAGAAAGtcaACAATCAAGGTGTGGTCAAAAAATTGTTATCAAGTGCAAATCAGTTTGTAGAAAGCCTTTAAATTGTGGCGTACATACATGTGAGAAAATTTGCCATTCAGGTCCTTGTGATTTATGTGATGTTTCTGAGGAGCAAGTTTGCTACTGTGGAGCTACCAAAAAGCAGGCCTTATGTGGCTCAGGTGACATAGATATTGTTGATGGCAAAAATGGTTGCTTCTCATGTGAAAATACCTGCAATAGGACACTAGACTGTGGTAACCATACCTGTGATGCAGTCTGCCACAAGGGTGACTGTGCTCCATGTAAACTCAAACCTGAGCTGATCGTTACATGTCCATGTGGCAAGACAACTCTTTCACAGCTACTGGGACCAGATGGGCAGAGAGAGTCATGCTTAGATCCAGTACCAACTTGTGAAAAAACATGTGGAAAAATCCTGCCTTGTAGTCCCAAGGAAGGCGATAAATCTAATTCATCATCAGAGCATCGCTGTAAAGAACCATGTCACCATGGTAATTGTGGTCCTTGCGATGGTGTATCTGTAGTAGTTTGTAGGTGTGGGGCTGCTATGAAGATAATCAAGTGCTGTGAAAGAACTACTGAAGATTATTTGTGTGATCAACGTTGCAACAAGAAGAGGCAATGTGGACGCCACAGGTGTAACCAGAAATGTTGTGTGAATAAGGACCACAAATGTGAGCTAATCTGTGGCAAGAAGCTTCGCTGTGGCATCCATACCTGTGATGAACCTTGTCACAGGGGTTACTGTCCTCCATGCTTCATGACAAGTTTTGAGGAACTTTCTTGTCACTGTGGTGCTACAGTACTCTTCCCACCCATACCATGTGGGACCCCACCACCTGACTGTACCAAGCCTTGCTCTAGACAGCATCCATGCTCACACCAAGTCAATCATTTATGTCATAATGAAGAGGTCTGCCCTCCTTGTACTGTATTAACCAAGAAAATGTGTAGTGGCAACCATGAActGCGATTGAACGTACAATGTCATGTGACAGACGTGTCGTGTGGTAAACGATGTGGCTCTATTCTTCCATGTGGACACAAATGCATCAATCTGTGCCACAAGcCCCCATGTGTTAATGATCAAGAGCCATGTACCCAACCATGCAACGAACCACGTAAAGAATGTGGTCACATATGTGGGGCACCTTGCCATAAGGAAACACCTTGTCCAGTACTGCCCTGTAAAGTAAAGGTAAAAGTCTCCTGTAAATGCGGCAGAAGATCAGAAATGGTTCCTTGTCTTCAAGGTGGAGACAAATCTGCCTTGGCTCAGTTCTACCAACGCTTGACAACAGAAACCTTGGCCAACAAGATGAAAGAAGTGCAGCAAGGACAAACCGTGGATATTGCTAGACTCATGATGCTCGATGACAAAGCTACAAAACACATTGATTGTAACGAAGAATGTGCGGTGCAAGAAAGAAACAGACGTTTTGCTGAAGCCCTTCATATTGATGAAAATACCGAAGCAGCTCTAAACGTACCCCGCATGCTGTACTCGTCTTTCCTAGTAAACGAAGCTAAAAGCAACATAGCCTTTTCATACAGTCAGTGGAAGAAGCTTTTGAGAATATAA

Transcript

ENSQPTT00000037968

CAGTCACTGTAACAGGCGAGGTTGAAAAATCAAAACCTAGGAATAATAAAAGACAAAGATATCCCTTCAAAGGGTACAGAAATCGACAGATTATTGGAAATTCTAATGTTATTGATGCAAGCCATTCAGAACAAGCTGGAATGTTAACTGAACAGTTACAAAATGAAAGTTATGAGTGTATGGTGTGCTGTGATAAGATATACTGTAGTGCTGCAGTATGGAGCTGCGATAATTGTTACCACGTCTTCCACTTGAAATGTGCCAGGAAATGGGCAAGGTCTCCTATGGCAGTTATAGAAGgGGAGGATGGTGGCTGGAGATGTCCTGCATGTCAAAACATTAGCCAGTCAGTCCCCAATGTTTACAGATGTTTTTGTGGCAAATCATTAGATCCTCCATGGAATGTCAGGGATGGAATAACACCACATAGCTGTGGAGAGTTATGTAAAAAGAAGCGTGATGCAGCTGACTGTCCACACCTTTGCAATCAATTGTGTCACCCAGGCCCTTGCCCAAGCTGTCCTGTGATGGTATCCAAGTCATGTGAATGTGGAAAAGAAAGtcaACAATCAAGGTGTGGTCAAAAAATTGTTATCAAGTGCAAATCAGTTTGTAGAAAGCCTTTAAATTGTGGCGTACATACATGTGAGAAAATTTGCCATTCAGGTCCTTGTGATTTATGTGATGTTTCTGAGGAGCAAGTTTGCTACTGTGGAGCTACCAAAAAGCAGGCCTTATGTGGCTCAGGTGACATAGATATTGTTGATGGCAAAAATGGTTGCTTCTCATGTGAAAATACCTGCAATAGGACACTAGACTGTGGTAACCATACCTGTGATGCAGTCTGCCACAAGGGTGACTGTGCTCCATGTAAACTCAAACCTGAGCTGATCGTTACATGTCCATGTGGCAAGACAACTCTTTCACAGCTACTGGGACCAGATGGGCAGAGAGAGTCATGCTTAGATCCAGTACCAACTTGTGAAAAAACATGTGGAAAAATCCTGCCTTGTAGTCCCAAGGAAGGCGATAAATCTAATTCATCATCAGAGCATCGCTGTAAAGAACCATGTCACCATGGTAATTGTGGTCCTTGCGATGGTGTATCTGTAGTAGTTTGTAGGTGTGGGGCTGCTATGAAGATAATCAAGTGCTGTGAAAGAACTACTGAAGATTATTTGTGTGATCAACGTTGCAACAAGAAGAGGCAATGTGGACGCCACAGGTGTAACCAGAAATGTTGTGTGAATAAGGACCACAAATGTGAGCTAATCTGTGGCAAGAAGCTTCGCTGTGGCATCCATACCTGTGATGAACCTTGTCACAGGGGTTACTGTCCTCCATGCTTCATGACAAGTTTTGAGGAACTTTCTTGTCACTGTGGTGCTACAGTACTCTTCCCACCCATACCATGTGGGACCCCACCACCTGACTGTACCAAGCCTTGCTCTAGACAGCATCCATGCTCACACCAAGTCAATCATTTATGTCATAATGAAGAGGTCTGCCCTCCTTGTACTGTATTAACCAAGAAAATGTGTAGTGGCAACCATGAActGCGATTGAACGTACAATGTCATGTGACAGACGTGTCGTGTGGTAAACGATGTGGCTCTATTCTTCCATGTGGACACAAATGCATCAATCTGTGCCACAAGcCCCCATGTGTTAATGATCAAGAGCCATGTACCCAACCATGCAACGAACCACGTAAAGAATGTGGTCACATATGTGGGGCACCTTGCCATAAGGAAACACCTTGTCCAGTACTGCCCTGTAAAGTAAAGGTAAAAGTCTCCTGTAAATGCGGCAGAAGATCAGAAATGGTTCCTTGTCTTCAAGGTGGAGACAAATCTGCCTTGGCTCAGTTCTACCAACGCTTGACAACAGAAACCTTGGCCAACAAGATGAAAGAAGTGCAGCAAGGACAAACCGTGGATATTGCTAGACTCATGATGCTCGATGACAAAGCTACAAAACACATTGATTGTAACGAAGAATGTGCGGTGCAAGAAAGAAACAGACGTTTTGCTGAAGCCCTTCATATTGATGAAAATACCGAAGCAGCTCTAAACGTACCCCGCATGCTGTACTCGTCTTTCCTAGTAAACGAAGCTAAAAGCAACATAGCCTTTTCATACAGTCAGTGGAAGAAGCTTTTGAGAATATAATTGATATCGCTAAAAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A6QLA0	Transcriptional repressor NF-X1 OS=Bos taurus OX=9913 GN=NFX1 PE=2 SV=1
Q12986	Transcriptional repressor NF-X1 OS=Homo sapiens OX=9606 GN=NFX1 PE=1 SV=2
B1AY10	Transcriptional repressor NF-X1 OS=Mus musculus OX=10090 GN=Nfx1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001383 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01422 all species →	zf-NF-X1	NF-X1 type zinc finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019786 all species →	Conserved_site	Zinc finger, PHD-type, conserved site	Interproscan
IPR000967 all species →	Domain	Zinc finger, NF-X1-type	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR034078 all species →	Family	Transcription factor NFX1 family	Interproscan
IPR019787 all species →	Domain	Zinc finger, PHD-finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12360 all species →	NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0000977 all species →	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000040324.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.