Gene detail

Detailed information of ENSQPTP00000040708.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031549311.1, malonate--CoA ligase ACSF3, mitochondrial-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000033320

TAGGCTAGACAAGCAATCAACGAGTATAAAACGGTGCAAAGATAACCTCCTAAAGTGATAAAAGATGATAAATGCATTCATTTGATACctctattaataataataagtcaTATCCTATAATTGTGATGGAGTACTTCATTGAAGACTCGGATTCTtcattactagttacaacgcAGGAATATTCTCATAAAATTAAACCCCtcgtagaaaagaaaggaatagCACATTTAGAAATGTCAGATGATGAAAGAACAGAGCTCAATGAGAAAGGTTTGCTTCCCACTGCAACAGAAATGGAAGTGAACGACTGGGATGATAAAGAAGCCATGATATTTTATACTAGTGGAACTACTGGGAAACCCAAGGGAGTATTAACAACACACGGGAATATCAGaGCCCAGATCTGTGGTATGATAACAGCCTGGGGCTGGACAGAGAATGATCGTATACTGCATGTCCTACCTCTCCATCATGTACATGGTGTCATCAATGTCTTATCTTGCTCATTATGGGTGGGGGCTACTTGCGTTATGCTGCAAAAGTTTGACCCTAAAGAGGTGTGGCAGTATCTCACTGGCTCTAGCCCTCAGTTGTCTTTGTTTATGGCTGTACCAACTATCTATGCAAAACTAATTGAGCATTACAATGACTGCAAACACAACCAAGAGATGAAAGACCACATTAGAACAATGTGTTCAAACATAAGGTTGATGGTCAGTGGTTCCAGTGCACTTCCACAGCCCACAATGAAAGAATGGTATGAAATATCTGGTCATTTACTACTGGAGCGTTATGGAATGACAGAAATAGGCATGGCATTATCAAATCCTTTGCATGGACCAAGATTACCAGGAAGTGTCGGAACTCCATTACCAGGTGTTGAAGTACGTATTGTAGCAAAAGATGATCAAGGCAAAGAACTTGATAATCAGGTCATAGTAGAAGGTGATGAACAGGGTTCTCAACTCCATCAACCAGAATTAGAATCATACAGAGGTGCACTACAAGTTTGTGGCCCATCAGTTTTCAAAAGTTACTGGAGAAAACCCTTAGCCACTAAAGAATCATTTACAAAAGATCACTGGTTCAAAACAGGCGATGATGCGGAGTACAAAGACGggatttacaaaatattgggCCGGTCTTCTGTGGATATCATCAAGAGCGGTGGATACAAAATCAGTGCTTTAGACGTCGAACGTGAACTACTTGCTCATCCAAGCATCAAAGATTGTGCAGTTGTTGGGGTGCCAGATCCCACATGGGGCGAAAGAGTAGCTGCGATTGTGTCCCTCCACTCTAATAAGAACCTCACTTTGCAAGAACTGCGTGAATGGGCTTCAGATCGACTCAGTGAATACCAAAACCCATCTGTAGTAAAACTTACTGATGAACTTCCAAGGAATACCATGGGAAAAGTGAACAAAAAAGAACTGATCAAGATCTTTTTTGGGGAGTAACTTCGTGTACCGGAATTGTCAGGGGAATgctattcaaattcaaatttcgaaTGCAAATTCATTCGGCTAGTAGTCGTGTCTCACTAGTAGTCGTGTCTTAgcatacacctaattgaaaaaacttcGGGTTCAAGAAAAGGTTATAAAagcatcaaagctaagaccgaaggggagcatgggaagacaaacgattatgctaatttcatgctttttgcagttttcccttcctgtgcacattatgtgcatcatggctttggcatgttaatctaggtcgaccgactttgctctactgtgcatttttacatgtctatacgcaaatataatacacatttcggagtacccaaaatccttttcggtcttagtttcgatgatatgaccttctccaacccgactacgttttttcaattaggtgtatatgaatgaatgaatgaatgaatgactttatttacacacacacattacAAGAGAAATAACATATATGAATAGCTAGAATTATAAATAGAAACAAGCATTTTACACTAAGTATTTACAAATATAGTGTAGATAAGGTGTATGTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GLK6	Malonate--CoA ligase ACSF3, mitochondrial OS=Xenopus laevis OX=8355 GN=acsf3 PE=2 SV=1
Q3URE1	Malonate--CoA ligase ACSF3, mitochondrial OS=Mus musculus OX=10090 GN=Acsf3 PE=1 SV=2
Q4G176	Malonate--CoA ligase ACSF3, mitochondrial OS=Homo sapiens OX=9606 GN=ACSF3 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008090 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13193 all species →	AMP-binding_C	AMP-binding enzyme C-terminal domain	Domain	Interproscan
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan
IPR025110 all species →	Domain	AMP-binding enzyme, C-terminal domain	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43201 all species →	ACYL-COA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006631 all species →	Biological Process	fatty acid metabolic process	Interproscan
GO:0031956 all species →	Molecular Function	medium-chain fatty acid-CoA ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18660	ACSF3; malonyl-CoA/methylmalonyl-CoA synthetase	EC:6.2.1.76 EC:6.2.1.-	Valine, leucine and isoleucine degradation	ko00280	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.