Gene detail

Detailed information of ENSQPTP00000040840.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031548605.1, signal transducer and activator of transcription 5A-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000031520

ATGTCTTTATCACAAAAACTGTCTACACTCGACGAAATCAAAAAGAAGGATATCAAAGCACAACTTCAGAAACATTTACCACATTATTCTGTAGAAGCTCAAGTTCTTCTTCATCCTAGCGTTCTCGAATGGATGGAATCACAATCGTGGGAAAGCAGTGATGCTTCTGTTGCAGTGAATTCGATAACAACGATGTTACAAGAGAAGAATGTTTACATGAGTAATGAGCCCATTGAACTTTTGAATCTgcttaaaatatattattttctaaaagatCTAGTAAATCAAGTGGTGGTTGATTCTGAGTTACAGAAAAATGATGAACAGATCAGAGAAATTCAGCAGAAACTAAAAGAGAGGGAAGAATTCTTTTTGTCTCAAACTATATGTAACCTGGAGATTGAAAAGCTCAAAATAACTAACAACAACTCAATGCTTACCCTGCAGCAAGACAAAAGTCAAAAAATAAGTGAAATCAGCAATACAATTATTACTTTATTACAGCCATTGTTTGATAACATCTCAAAAgttataacaaaaaacaaagatCTGCAAAGCCATATCCTCAGTCAAATAGCTGAATGGAATTTCAACAAACAACAAGCACAAGTTGGGTGGCCTGTCTTCTCCTTCTCAGAATTCCTGCAACCTTTAATTCTATTgtGTAATAGATTTGCAAGAATCCTTTGGTCAACACGCAACCAGACAGAAAAGCTAAGAGATATCCTTACTAAATTTCGAGTCAATGAGGAAAGTCTCATACAAGCAGAAACCATGAAGAGGGAATCCAGAAGCATGCTGAGTGCTTTTCTGAAGAGGTGTTTTGTTGTAGAAAAACAGCCACCAGCAACTCAACTTATTGACAAAGGATTCAGTGTTTCTTTGAGACTTTTATTGGGAAGCCAGATTTTGTCTTCTAGTCATGCTTCAACTGTCACTTGCAGTCTTCACTTggaTGACGACATACGGCACTTTTACAGAGCAAAGTTTGAAAACGTTAAAGCCCAAGATGAAAACatcaaaaatgtccaaaacaacaaaaaaTGTCTCACTTACGACAAGCAGACAGAATCCTTCTGCGTCTCGTTTGATAAACTGAAATTGCACaaacaagagaaaagaaaagctaAACTAAATGAGGATAAGACTAGGCTGGTGACGGACCAGAAAAGCGGTTTGATGTTTCAGACACAAATCATGATTGGCACCGAAAGCTTTACCATCGAGACATTCTCGGTGCCAATAGTGGTGATGACAAACACGAGCCAGTGCCTGGAGTCAGAAGCTACGATTTTCTGGGACAATGCTTTTGGTAGAAAAGATCGAGAGCCTTTCACATCACCTGAGAGAGTACCACTGGGTGATTTTTTGGATGCTCTAAACAAAAGGTGGACAAAGTCAAACGAAGGGGAGCTTCAAGATTATCATCTCAACTATTTAGCGAAAAAATTGTTTCCAGATCTCACGGACATGAGAGATTCTCACAAGTTCTATGTAACCAAACGAATGTTTAACAGAgAACACATGGGGGGCCCCTGTAAATTCACCTTCTGGAGCTGGTTCTATAAAATTATGAAACTGGTAAAGGAATTCCTGATCGACGAATGGCGAGAAAAAAAAATCTATGGATTCATCGACAAACGTGAAGCAGAGTCCAAACTGAATGAATGCCTGGTTGGGACATTTTTGTTGAGATTCAGTGACAGTATTCCTGGTGGTATAACCATAGCATTCAAAGAAAACATGGAAGGTTGTAACCACGTGCAACCATGGACGAAAGATGAACTGAAGCAGAAATCATTTTCTGACAGCATGAGAGACTTGCAATATGACAGTGAATTGAAATGCCTCCAATATTTATACCCTTCAACACCCATAGACCAGGCATTTCCTCAAAAGGACCATTTAAACAACAATGAACAGTTCAACCCTCGATACCCGAAAAAAGCCCCTATTCGCGTGGTCCGACACGACGATGGCGGGTCCACTTCAGCATCGAATTTTTCTTCGAACCGATCATCTTCATTTCAAATCACTTCTCCTCCGCCATCGGTTGGAAGAAACCCCGAAAGTTCTAATGGTAATGAACAGGCCTTCTCTCCAATGTCGTTCGACCACGATCCGCTTCTCAGTCAACCCATGTTTTTTAATGACCAAGAATTGACCTTGAATTTGCCCGACCAAATTATGGATGGAGAGGGTGAAGACCCTTGCACTGAGCCCCTAGAGACATttttctgggggacaaaacaatga

Transcript

ENSQPTT00000031520

GTCTGAGTCTGGGTACTAGTTTTATTTTCCAATTTCTGAGAAAAATGACGTAATGAGAATCGGGGTAAATGAAGAACGCTGATTGGTTGATCTTGGCCACGTGGTTTCTCTAACTTCCTgtttttgtaaacaaaatcGACCTGGAAGAGCGAATGAGCTGAAAAATTGGCAAGCTTTTCAACATGTAAGGACATTTTGGAGAGTAATTTATACTTATTTTAGATATGTCTTTATCACAAAAACTGTCTACACTCGACGAAATCAAAAAGAAGGATATCAAAGCACAACTTCAGAAACATTTACCACATTATTCTGTAGAAGCTCAAGTTCTTCTTCATCCTAGCGTTCTCGAATGGATGGAATCACAATCGTGGGAAAGCAGTGATGCTTCTGTTGCAGTGAATTCGATAACAACGATGTTACAAGAGAAGAATGTTTACATGAGTAATGAGCCCATTGAACTTTTGAATCTgcttaaaatatattattttctaaaagatCTAGTAAATCAAGTGGTGGTTGATTCTGAGTTACAGAAAAATGATGAACAGATCAGAGAAATTCAGCAGAAACTAAAAGAGAGGGAAGAATTCTTTTTGTCTCAAACTATATGTAACCTGGAGATTGAAAAGCTCAAAATAACTAACAACAACTCAATGCTTACCCTGCAGCAAGACAAAAGTCAAAAAATAAGTGAAATCAGCAATACAATTATTACTTTATTACAGCCATTGTTTGATAACATCTCAAAAgttataacaaaaaacaaagatCTGCAAAGCCATATCCTCAGTCAAATAGCTGAATGGAATTTCAACAAACAACAAGCACAAGTTGGGTGGCCTGTCTTCTCCTTCTCAGAATTCCTGCAACCTTTAATTCTATTgtGTAATAGATTTGCAAGAATCCTTTGGTCAACACGCAACCAGACAGAAAAGCTAAGAGATATCCTTACTAAATTTCGAGTCAATGAGGAAAGTCTCATACAAGCAGAAACCATGAAGAGGGAATCCAGAAGCATGCTGAGTGCTTTTCTGAAGAGGTGTTTTGTTGTAGAAAAACAGCCACCAGCAACTCAACTTATTGACAAAGGATTCAGTGTTTCTTTGAGACTTTTATTGGGAAGCCAGATTTTGTCTTCTAGTCATGCTTCAACTGTCACTTGCAGTCTTCACTTggaTGACGACATACGGCACTTTTACAGAGCAAAGTTTGAAAACGTTAAAGCCCAAGATGAAAACatcaaaaatgtccaaaacaacaaaaaaTGTCTCACTTACGACAAGCAGACAGAATCCTTCTGCGTCTCGTTTGATAAACTGAAATTGCACaaacaagagaaaagaaaagctaAACTAAATGAGGATAAGACTAGGCTGGTGACGGACCAGAAAAGCGGTTTGATGTTTCAGACACAAATCATGATTGGCACCGAAAGCTTTACCATCGAGACATTCTCGGTGCCAATAGTGGTGATGACAAACACGAGCCAGTGCCTGGAGTCAGAAGCTACGATTTTCTGGGACAATGCTTTTGGTAGAAAAGATCGAGAGCCTTTCACATCACCTGAGAGAGTACCACTGGGTGATTTTTTGGATGCTCTAAACAAAAGGTGGACAAAGTCAAACGAAGGGGAGCTTCAAGATTATCATCTCAACTATTTAGCGAAAAAATTGTTTCCAGATCTCACGGACATGAGAGATTCTCACAAGTTCTATGTAACCAAACGAATGTTTAACAGAgAACACATGGGGGGCCCCTGTAAATTCACCTTCTGGAGCTGGTTCTATAAAATTATGAAACTGGTAAAGGAATTCCTGATCGACGAATGGCGAGAAAAAAAAATCTATGGATTCATCGACAAACGTGAAGCAGAGTCCAAACTGAATGAATGCCTGGTTGGGACATTTTTGTTGAGATTCAGTGACAGTATTCCTGGTGGTATAACCATAGCATTCAAAGAAAACATGGAAGGTTGTAACCACGTGCAACCATGGACGAAAGATGAACTGAAGCAGAAATCATTTTCTGACAGCATGAGAGACTTGCAATATGACAGTGAATTGAAATGCCTCCAATATTTATACCCTTCAACACCCATAGACCAGGCATTTCCTCAAAAGGACCATTTAAACAACAATGAACAGTTCAACCCTCGATACCCGAAAAAAGCCCCTATTCGCGTGGTCCGACACGACGATGGCGGGTCCACTTCAGCATCGAATTTTTCTTCGAACCGATCATCTTCATTTCAAATCACTTCTCCTCCGCCATCGGTTGGAAGAAACCCCGAAAGTTCTAATGGTAATGAACAGGCCTTCTCTCCAATGTCGTTCGACCACGATCCGCTTCTCAGTCAACCCATGTTTTTTAATGACCAAGAATTGACCTTGAATTTGCCCGACCAAATTATGGATGGAGAGGGTGAAGACCCTTGCACTGAGCCCCTAGAGACATttttctgggggacaaaacaatgaattttctttgcataagaaaagacggcctatagagcgttttcacgtgacgtcacagcgaccattatggggtaccaaaacaatacattttctatcctccgggaattgaactctatttttatgcaaatactgtgcagaaagtttctattgtttatggctgccttctcacgtgagtgaaaacgctctactGTTTTGTCCCCAaaaacaattcctctaggaaatcaatgcaagggatttctttgtatttttgtttataatataaaCGTACTTATTAAATACACACTCATAATGCAGATACAACTaactaataaaaatatttcttaaataaaagtattttcTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P42230	Signal transducer and activator of transcription 5A OS=Mus musculus OX=10090 GN=Stat5a PE=1 SV=1
Q62771	Signal transducer and activator of transcription 5A OS=Rattus norvegicus OX=10116 GN=Stat5a PE=1 SV=1
Q95115	Signal transducer and activator of transcription 5A OS=Bos taurus OX=9913 GN=STAT5A PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003471 (this species only)
Transcription factor family	STAT · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21354 all species →	STAT_linker	Signal transducer and activator of transcription, linker domain	Domain	Interproscan
PF02864 all species →	STAT_bind	STAT protein, DNA binding domain	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015988 all species →	Homologous_superfamily	STAT transcription factor, coiled coil	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR048988 all species →	Domain	Signal transducer and activator of transcription, linker domain	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR012345 all species →	Homologous_superfamily	STAT transcription factor, DNA-binding, N-terminal	Interproscan
IPR001217 all species →	Family	Transcription factor STAT	Interproscan
IPR013801 all species →	Domain	STAT transcription factor, DNA-binding	Interproscan
IPR008967 all species →	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11801 all species →	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0006952 all species →	Biological Process	defense response	Interproscan
GO:0007259 all species →	Biological Process	cell surface receptor signaling pathway via JAK-STAT	Interproscan
GO:0042127 all species →	Biological Process	regulation of cell population proliferation	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000040840.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.