Genomic Location: not available for this species
NR annotation: XP_031554273.1, homeobox protein Hox-B4-like isoform X1 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families
| CDS |
| ENSQPTT00000019531 |
| Transcript |
| ENSQPTT00000019531 |
| Protein |
| ENSQPTP00000041845.1 |
| UniProt accession | Description |
|---|---|
| P81192 | Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=187800 GN=HOXA4 PE=3 SV=1 |
| Q9PVS4 | Homeobox protein Hox-C4 OS=Oryzias latipes OX=8090 GN=hoxc4 PE=2 SV=1 |
| P09020 | Homeobox protein Hox-C5 (Fragment) OS=Xenopus laevis OX=8355 GN=hoxc5 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000082 (this species only) |
| Transcription factor family | Homeobox · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR050296 all species → | Family | Antennapedia-type homeobox | Interproscan |
| IPR020479 all species → | Domain | Homeobox domain, metazoa | Interproscan |
| IPR017970 all species → | Conserved_site | Homeobox, conserved site | Interproscan |
| IPR000047 all species → | Conserved_site | Helix-turn-helix motif | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45659 all species → | HOMEOBOX PROTEIN HOX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0009952 all species → | Biological Process | anterior/posterior pattern specification | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K09304 | HOX_4; homeobox protein HoxA/B/C/D4 | - | Transcription factors | ko03000 | deepkoala |
