Gene detail

Detailed information of ENSQPTP00000042469.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_020893091.1, photoreceptor-specific nuclear receptor [Exaiptasia diaphana]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9TTF0	Photoreceptor-specific nuclear receptor OS=Bos taurus OX=9913 GN=NR2E3 PE=1 SV=2
Q91379	Nuclear receptor subfamily 2 group E member 1 OS=Gallus gallus OX=9031 GN=NR2E1 PE=2 SV=1
Q9Y466	Nuclear receptor subfamily 2 group E member 1 OS=Homo sapiens OX=9606 GN=NR2E1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000308 (this species only)
Transcription factor family	ESR-like · all TF in this species
Transcription factor family	NGFIB-like · all TF in this species
Transcription factor family	RXR-like · all TF in this species
Transcription factor family	SF-like · all TF in this species
Transcription factor family	THR-like · all TF in this species
Transcription factor family	GCNF-like · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00105 all species →	zf-C4	Zinc finger, C4 type (two domains)	Domain	Interproscan
PF00104 all species →	Hormone_recep	Ligand-binding domain of nuclear hormone receptor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035500 all species →	Homologous_superfamily	Nuclear hormone receptor-like domain superfamily	Interproscan
IPR001628 all species →	Domain	Zinc finger, nuclear hormone receptor-type	Interproscan
IPR050274 all species →	Family	Nuclear hormone receptor family NR2 subfamily	Interproscan
IPR000536 all species →	Domain	Nuclear hormone receptor, ligand-binding domain	Interproscan
IPR013088 all species →	Homologous_superfamily	Zinc finger, NHR/GATA-type	Interproscan
IPR001723 all species →	Family	Nuclear hormone receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24083 all species →	NUCLEAR HORMONE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0004879 all species →	Molecular Function	nuclear receptor activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0048856 all species →	Biological Process	anatomical structure development	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000042469.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.