Gene detail

Detailed information of ENSQPTP00000042580.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031569578.1, uncharacterized protein LOC116304064 isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000011305

ATGATACACGATGAATTTGCTTTCGATGGTTACCTTGACGACGGCGTAGAAGATGTCAATATGGGTGAATATGTGATGTCTCTATCTGGGATGAGCGAGGACATGTTCAAAGAGTCTGTCAGAGACCAGTACAGTGACTTGTACTGGGATGATGATTTGCTTCAAGACATGTACATCCTGGTCAATAGGAAACTCACTTCACGAAGACCCACTCTGAGATTCTCCGAGAGCATTGCCAGTGATGTGAGTCGACCAGGTTCATCACTGTCCATGGATTCTAATCCCGACGCTAGTCACCTGTCCACCAGGTCTGTCTCACGTACCAGCAGTGAAAGGAGCTTTCTTGAGACCAGAGACTACGTGATGTCATCACTTGGAGAGCCAACACAGTTCCTACCATTCAAAATGATCTGTCCCGAGATAACTAGAGATATCATTGAAGAATTAGGACCAGTGTTTGAAGATTATCAAAAGGAAATGAAAATCAAGTTAGCGCCGAGTATAAGTGAGCTAATGGAGAAACTGGGAGCCAAGATTCTGGAAATTGGCCAACAGTTAACTCTAGAGCGTaaggcaaaaaagaaaaacatcgcTTCGTTCAAGAAGATAGCAgatattgataataaaaaagATGTGAAAGATCTGGCCAGTAAACTGTTACAAGAAATCGAAGAAAGCgacaaaaaaatcatatatttgaaatatatccAGAGACGACTCAGGAACATCTATGCAGAACGATTTGGTTTGGATCACTCTTTGCTTTATTCCTTCGTCAGCAGCTATGGTATTGAGAACGTGTCTCTAGAGCCCAAGAGACAAAACAACCTCTTGAGTTTCTCTCCGCTTTGGGACCAGCGAGGTAAGCAGTCATCAGAAGCTCACGGTGAATCGATACGAGGTCCTGTGCTACAGTACGGCACCACCCAGGGTCTGTTCTCTTATCTGTTTGCAAGGTACTCCATGAGCCAAGCCTTTGTACGGTTCTTCCTGTACACCTTCCGTTATTGCGCATCACCCGACGAGTTGTTTGATTTTATCCGTGACAAGTGCAGAGCATCTTTGAGAGCTGAGACAGGATCCGACAAGACTTACAACCATCAACTCCAGATTCGTTATCGTGCTCTTGATCTCCTGGCTGAATGGGTTGACTGCTGCTTTCAGTTTGACTTTAAGACAAATCCTGGGCTGTTGGAAAGTCTTTTCGCTTTTCTCAACAAAGAGCTAATACCAGTGGACAAAACTGAACGTGGTAAAATGCTGGTGGAGCTGATAACAGAAAAACAGCGAAAAGACGAAGAAGAACACATCGAAGAGACGACGGACACCCTTGCTGTGTTACAGACAGACGACAACCAGGGTTCGATATCAGAGAAAGAGTCACCTAAAAAGttccCAATTAAACGCAAGAAGTCACCAGTGCAGTGTTTCAAGCGCGGCTCACCTCAAGCCACTTCTATCTACAAACCAACAGTATACCTTAAAGCCATGTCTGTTATTGATCATTCATCGAGAACCATAGCAGAACAACTGACTCTTATACAACAGGATGTCTTTGCGCACGCACACTCCATCCACTTCCTCAACTCCCGTACTCTGGGGATAGGGGTGGGGAGACTTTCGCCGACCAAGGAAACCACTCAACTTGACAGCATGCTTGGGTTTAGTGCGGGCAGGCGAAGGAGTATCTCATCAGAAACTCTAAACACAGACAGCCCAAGTCCAAGGACGTCAGGAGAGAATAGCCTGTTTGTGTGTCAGGCTATCACGGATGGGTGTCTGGAAGGCTTGCTAATGCATGCACAAGACGTATCTATGTGGGTGGCGGTGGAGTTATGTAGTGCACCTTCTGTCAAGAACCAATTAGTGCTTATCCAGAAGTACATCAGCGTTGCCAAGTACTGCGCTGAGATGAGAAATTTCGCTACCAGTGTCCAAGTAGTGGATGCTCTTGAAATGTTTGTGATTCGACAACTACCGGTCTGGAAACAAGTCCCAAATAAGGTGATCCAAACGCTCGAAGAACTCAAGGCAATCAAGGTTCTCTTGAAAACAGACAGCTCCTGGTTACTGAAGGACAACGCTTACCGCGAAAAGCCCACAATACCTTGCGCGCTGTTATTCCTCATGCACATCCAGCAGCTGGAGCTTGGTGGATTTACGCTGACTAATGGCATGTACAAGTGGACGAAAATGAGGTCCATAGCACGTTTAGTCGACCAGATTCGCCTGTTCAAGCAAATGCGATACGCCTTTGAATCGAACGAGGCGCTCAAAGATCGTCTACGCATGCGCATCCAGGAATGCAGGGAAGAGAACCTCCATGCTCTTGCTGCCGAGAATGCTACTAACTTCCATCTGACCTCGTCTCAAAGCTCAAGGAAATTCCAGGAGGCATTTAAGAAAATGAAAGCCACGTTTGGCAATGGATAA

Transcript

ENSQPTT00000011305

TCCAAGGACGAAATGATGTGGTAAGTGAGAGGAACGGATCACATGACAAAGAACATCAGCTTGACAACCAAGGACGAATTGGTGCAgtaagagagagaaaaacatCTCATGAAcgaattaaacaaaagaatgaagAGCGGGAGAAGATCAACCCCAAGACAGATAGAACGATATGTAACGACAAAGAACACTTGAACGAAAGAGTGGAGGTTGCAAAGAGAAGACTATCTCATGAAAAAGATAAGCAAGCGTCTTTAAATACTTCTGGAGAAAACGAAGTCCTAAACAAACTAGTCGATATGATACACGATGAATTTGCTTTCGATGGTTACCTTGACGACGGCGTAGAAGATGTCAATATGGGTGAATATGTGATGTCTCTATCTGGGATGAGCGAGGACATGTTCAAAGAGTCTGTCAGAGACCAGTACAGTGACTTGTACTGGGATGATGATTTGCTTCAAGACATGTACATCCTGGTCAATAGGAAACTCACTTCACGAAGACCCACTCTGAGATTCTCCGAGAGCATTGCCAGTGATGTGAGTCGACCAGGTTCATCACTGTCCATGGATTCTAATCCCGACGCTAGTCACCTGTCCACCAGGTCTGTCTCACGTACCAGCAGTGAAAGGAGCTTTCTTGAGACCAGAGACTACGTGATGTCATCACTTGGAGAGCCAACACAGTTCCTACCATTCAAAATGATCTGTCCCGAGATAACTAGAGATATCATTGAAGAATTAGGACCAGTGTTTGAAGATTATCAAAAGGAAATGAAAATCAAGTTAGCGCCGAGTATAAGTGAGCTAATGGAGAAACTGGGAGCCAAGATTCTGGAAATTGGCCAACAGTTAACTCTAGAGCGTaaggcaaaaaagaaaaacatcgcTTCGTTCAAGAAGATAGCAgatattgataataaaaaagATGTGAAAGATCTGGCCAGTAAACTGTTACAAGAAATCGAAGAAAGCgacaaaaaaatcatatatttgaaatatatccAGAGACGACTCAGGAACATCTATGCAGAACGATTTGGTTTGGATCACTCTTTGCTTTATTCCTTCGTCAGCAGCTATGGTATTGAGAACGTGTCTCTAGAGCCCAAGAGACAAAACAACCTCTTGAGTTTCTCTCCGCTTTGGGACCAGCGAGGTAAGCAGTCATCAGAAGCTCACGGTGAATCGATACGAGGTCCTGTGCTACAGTACGGCACCACCCAGGGTCTGTTCTCTTATCTGTTTGCAAGGTACTCCATGAGCCAAGCCTTTGTACGGTTCTTCCTGTACACCTTCCGTTATTGCGCATCACCCGACGAGTTGTTTGATTTTATCCGTGACAAGTGCAGAGCATCTTTGAGAGCTGAGACAGGATCCGACAAGACTTACAACCATCAACTCCAGATTCGTTATCGTGCTCTTGATCTCCTGGCTGAATGGGTTGACTGCTGCTTTCAGTTTGACTTTAAGACAAATCCTGGGCTGTTGGAAAGTCTTTTCGCTTTTCTCAACAAAGAGCTAATACCAGTGGACAAAACTGAACGTGGTAAAATGCTGGTGGAGCTGATAACAGAAAAACAGCGAAAAGACGAAGAAGAACACATCGAAGAGACGACGGACACCCTTGCTGTGTTACAGACAGACGACAACCAGGGTTCGATATCAGAGAAAGAGTCACCTAAAAAGttccCAATTAAACGCAAGAAGTCACCAGTGCAGTGTTTCAAGCGCGGCTCACCTCAAGCCACTTCTATCTACAAACCAACAGTATACCTTAAAGCCATGTCTGTTATTGATCATTCATCGAGAACCATAGCAGAACAACTGACTCTTATACAACAGGATGTCTTTGCGCACGCACACTCCATCCACTTCCTCAACTCCCGTACTCTGGGGATAGGGGTGGGGAGACTTTCGCCGACCAAGGAAACCACTCAACTTGACAGCATGCTTGGGTTTAGTGCGGGCAGGCGAAGGAGTATCTCATCAGAAACTCTAAACACAGACAGCCCAAGTCCAAGGACGTCAGGAGAGAATAGCCTGTTTGTGTGTCAGGCTATCACGGATGGGTGTCTGGAAGGCTTGCTAATGCATGCACAAGACGTATCTATGTGGGTGGCGGTGGAGTTATGTAGTGCACCTTCTGTCAAGAACCAATTAGTGCTTATCCAGAAGTACATCAGCGTTGCCAAGTACTGCGCTGAGATGAGAAATTTCGCTACCAGTGTCCAAGTAGTGGATGCTCTTGAAATGTTTGTGATTCGACAACTACCGGTCTGGAAACAAGTCCCAAATAAGGTGATCCAAACGCTCGAAGAACTCAAGGCAATCAAGGTTCTCTTGAAAACAGACAGCTCCTGGTTACTGAAGGACAACGCTTACCGCGAAAAGCCCACAATACCTTGCGCGCTGTTATTCCTCATGCACATCCAGCAGCTGGAGCTTGGTGGATTTACGCTGACTAATGGCATGTACAAGTGGACGAAAATGAGGTCCATAGCACGTTTAGTCGACCAGATTCGCCTGTTCAAGCAAATGCGATACGCCTTTGAATCGAACGAGGCGCTCAAAGATCGTCTACGCATGCGCATCCAGGAATGCAGGGAAGAGAACCTCCATGCTCTTGCTGCCGAGAATGCTACTAACTTCCATCTGACCTCGTCTCAAAGCTCAAGGAAATTCCAGGAGGCATTTAAGAAAATGAAAGCCACGTTTGGCAATGGATAAAGGACTGTAAGGGAGAAATGTCGATACCTGAAGCTCATTCCTCTCTCCGGAATCTCGTACCAAAAGCTTGCGTTTCTTCTAGCCTGCGAAGAACGGGGTCTCTGGCATAATCCgtttttttgagaccaggatttcttggacttccggtaaaagagcgcatgcgttcaaagacttgccaaaaataaatataaatttccCCGATTTCTAATGTTTATTTTGGTCGAAAGTAAATACAGAACTCTGTTTTGATGCAtgaatttcattgattatatttcactttCTGGAAATttcgcatgcgccaaaaaaatggattatgccagagcttTTGTTATATGCCGCAGGCCAGacgaaacgcaggctctggatACGAGATTGCTCTCCCCGTAGATAGAGTATAGTGAAAAGCCGGGACATATGTCAAGGAGTCCAGCTGATCACTTGTCTGAGGTACTGCCGAAGAAAAttgttaaagaagaaaaaagattacAACACTCGAAAATTCCAGAACGCGCAACAGCATTGACAtgaaacactgaaatggcttcccaatattttttatgtgcttcatccaatcacaatgcgTAGATATTTGATTACGGTTAGTCTGCGTCAGAAGACTACGTATTTGCCGTATCTTTTGCTATTTAGAAAAAACGTGCTACACATCCTACTTGCATACGGATTTTGTCTTCGCCACTTTCTATCATTGCGTAGGGAAATAACAAGACTGATATGAatcatattaatatattattcactgtaaaaaaaaaaccaaaaaaacaatacaataCTATGGGGACCTTTGATGTAAATATTTAGTAAATATATCTAGACATTGTCAATTCATTATTCAAACATCG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q76NI1	Kinase non-catalytic C-lobe domain-containing protein 1 OS=Homo sapiens OX=9606 GN=KNDC1 PE=1 SV=2
Q0KK55	Kinase non-catalytic C-lobe domain-containing protein 1 OS=Mus musculus OX=10090 GN=Kndc1 PE=1 SV=2
G5EDB9	Rap guanine nucleotide exchange factor OS=Caenorhabditis elegans OX=6239 GN=pxf-1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004697 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00618 all species →	RasGEF_N	RasGEF N-terminal motif	Domain	Interproscan
PF00617 all species →	RasGEF	RasGEF domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001895 all species →	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR036964 all species →	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR023578 all species →	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR029899 all species →	Family	Kinase non-catalytic C-lobe domain-containing protein 1	Interproscan
IPR000651 all species →	Domain	Ras-like guanine nucleotide exchange factor, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21560 all species →	VERY KIND PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264 all species →	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0032045 all species →	Cellular Component	guanyl-nucleotide exchange factor complex	Interproscan
GO:0043025 all species →	Cellular Component	neuronal cell body	Interproscan
GO:0048814 all species →	Biological Process	regulation of dendrite morphogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000042580.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.