Gene detail

Detailed information of ENSQPTP00000043070.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559381.1, spartin-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000005680

tggcgtccgtGCAGAAGGAAGTTACTCACTTGTTATTCTATTATTAGACCATTTCGTAATCCTCACACCACTATTCTACCATTCTTTCTGCTCCAAAAACATGGATGACAACGCTCCAGATAAAATAAAGTCCTACCACGACGAAGCCTTCAGATATATCAATCAAGCTCTTACTTTTGACGAAAAGGGAGATGCAAAACAAGCCTTTCTACTATACAACAAAGGGCTTAGGCAACTTATCCTGGGTTCAAATCTACCATGTAGGGGCTCTGGACCACAGTTTGACCATGCCAAGAAAATGCAAGAAAAGATGAAATTGACAAAAGATCAAGTCGAAGATAGAGTAGCTGCATTACAGTCACCGTCCAGTGATGCAGTACCACAGAAATCACAGCCTACTGAGAATGGAGTTGAACACCATACCCTGTCAACCTTGTCTCAAGGTGCTTTGTGGGAGGACGTCAATGAGCTTCTCGTTCTTGAAGAAGGTGTCAAGATGTTCTTTGTCAGTGAACTAGGAAATGTGACTACAATATCACAGCCACAAACATTGCGAGCTTACCAGTTTGTGAAATATGAAGAAGGATGTTCTCAGCCTCCAGCGTTTCTTCAGTGCAGTGGTTGGATATTCCCCATGATACCCAAGAGATCTCCAGTGCTCAACACAGAGCCTCACACCTACATGTTCCCAGATATCACCATCAACCTCAATAACCCAGCACCCCAGAGACGTCCCCAAAAAGCCTTTGCTTCTGTTGGACTGATAATAAACCCTCACATCACTACTGCCGCGCTGAAGAGATTTGAGAGGATTTTAGAGTGTTATACAGATTTTCATCATTATACTCCTACTGCCCAGGAATACAAAGAGCTGGCTGTGAATGAAAATGGTGTGGAAACCATCGCAAGCAGTACTCATTCTGGCGAGGGCAGTAGCGCATATGCAGAATACTACCCGGCGTATAATGGAACAACACAACATGGATCTAGTGAACTTGCAATACAAGAACAAACAGGGGATGTTGATGAGCTTGGCCTGTCCTGGGGTGACAAGATTTCTATGgGCATAGCTGTTGCAGCTGAGGCCATTGCTTGGGGGTTAGTCAAAGGAGCCGAGGCAGGGACTCACATCGTTCATCAGGGTGGTGTCAAGCTAAGAACGTCCTTAAAACCAAATGAAACTCCAACTGAAGTGGATGAAAATGTTCAGCAGAAAATAAGACATGTCAAGTCTGTGGCAGGTGTTGCCTGCCAAGTAAGTAGTACAGTGgtttctgctgttgctgccATGACAAGAGAACTAGCGAGAAGTGTTGCACCTATTGTGGTGGAAAAGGGAGGAAAGATGCTTCCAGAATCCgtgaaaaagaaaaccaatgatGAAAAGGGCCAGGTAGTGGTCCAAAACGCTGTCAAGGTTGCTGTCGGTGGAGCTCAAGGGTTTGCAACTGTTTATGAAGGGCTAGAAAGATCTTGGAAGTTACTTTACAAAAGTCTTCAGCATGCCACAGTACAAACTGCAGATCACAAATATGGACCCGCTGTTGGTGAAGCAACTGACAATTCGCTGGGTGCTTTGGGATTTGCTCTTCAGACATGTTGGAACATTGATAATCTTGGGGTCAAGGCTCTGGCAAAGAGAACTGCCAAGGACACTGGGAGAGAGTTGATTGGTGAAGCAGAGAAAAAGTACCTTCCACCGGCTGACGACCAAGAAAGACATATGCAACAAATGAATGGccacaaataataataataatagaaaaacTAATACTGATTAGATTTTTTTGATATACATTTTCGCTCGTCCCAGAGCCTCCTCCGACCTTTTCAACATAGATACTCTGGAAAGGACCTGGGAAAGaggatattttttatatttacgtTAAATATCATCTTAGTGATAAGTTTGGGTGGTTGAGTGTTAGGATCCGAAGGCTGGTCAAACATAACCAGCCCTTTCGCAGAGGTGGCCACAGTCCACCGCCCACCTGGCGCCCATCACACCTCTATAATtaccctatttcactatgacgtcactgcttgtttatgtgggggatagaatcgctaAATCctatagaaaattcaacaaaatttgctccaaGTGAAagagtttaatctaaaatagcctggttttcagatataatatgtgttattATGtaccaaaaaatattctgagcgtttgctggctattctacttctcttcgtggattgatacgggttttagaacaattttcggtgaatttgcgttgatttgaccccattcaacgaccatgatcctttgcatttaaacaataattgttttgatgtgacgtcatagtgaaatagggcaattaaatTGTGGAGATATTTACCATTTCCTCTACTTACCCCTACGAAGTTTTGAGAGGTGGCGGGAGGGTAAAGTTTTCGACAAGCGCTTGGCCAAATGACAAtctgatttttttattcaagttgCAATTTTTATGCgaataattattaaaaaaacaaatatttgagTCGCTTATGACTTAATTAGCTCACATCAGCATTATTCCTTTCGATGTGGGACACGGttccattttaaaaatcttacGCGACTTCATTTCGACCataattaatattaactatAGTAAATGTTAATATT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0JNJ3	Spartin OS=Bos taurus OX=9913 GN=SPART PE=2 SV=1
Q8R1X6	Spartin OS=Mus musculus OX=10090 GN=Spart PE=1 SV=1
Q8N0X7	Spartin OS=Homo sapiens OX=9606 GN=SPART PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007600 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06911 all species →	Senescence	Senescence domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036181 all species →	Homologous_superfamily	MIT domain superfamily	Interproscan
IPR009686 all species →	Domain	Senescence/spartin-associated, C-terminal	Interproscan
IPR045036 all species →	Family	Spartin-like	Interproscan
IPR007330 all species →	Domain	MIT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21068 all species →	SPARTIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0051301 all species →	Biological Process	cell division	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19366	SPG20; spartin	-	Endocytosis	ko04144	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.