Gene detail

Detailed information of ENSQPTP00000044294.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031570768.1, stAR-related lipid transfer protein 3-like isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000053571

CGTGATGCCATTAGAGCAGGGAAGAAAGTAATAAGGAAAAACCGAACGATTGAGGATTTCTAAGCagaaagaagaaaacgaaagaagaaaaactctACCATGCGGACATTTTATATCCTCATGCTATCACAGTAAGCAAGGACTTCGTTTTTAAAAGATATAACGGTACAAATTACATCGTTATGGACCGCCTTCCTAACGGTATTAGCAGACGGTCCTACTCGAGCGGTAGCCGCACAGATTCGACTACGACTTTTCGTCAGTTTTCACCTTCTAGAAGAATGTTCTGCCTGCTTACAGTATTTGACTTCTTTTTTATACTGGTAGCTTGGTTGATATATGCAAATGCTTTTAATGGATTAGAGCTGTCACTAGAAAAGGAAGTCGCACATTACAAAATTGCATCTTCTCTGTTTGATATTGTGCTGTTATCATTATGGAGAATGGTAGTGTTACTTCTTGTTTATGCCTTGTTCCATAGTAGAAAGTGGTATGCTATAGCAATAACTACTTCTATAAGCACTGGATTCATTATTGCTAAAGTTGTTAAATACGATTTTAAAACAAACAGTGGTCATCCAATGGCTTATGTTAGTGTCATTGTCTCACTCTTCCTCTGCTGGGCTGAGACTCTGTTTCTTGACTTCAAGGTCTTTCCTGCAGAATTAAAGGCTGAACAAAGAATGTTGGCAGcAGAAAGTTTAGATACGACAGCTGGTGAAAGAAGACCGCTGTTGGACGAGAATCCAAGTTCGTACCACACCCGAACATGGCTAACAGAGCAATCATCTTTCTACACTCCATACGGATCACCACCCAgTTCGATTACAAGCGAGGATGAAGGCGAAGATGCTAACGCGCAATTGTCATCAGAGGACGTACACttcaaaagaaaagcaaaagaaatattCGGCATCGCTTGGGATTTACTGACAGTTGATAAGAAATGGAAGCATGAAAAAAACAAGGATGGTATAATCGTGGAAAGTTGTATTCTCAAGGATACAGGAAAAATGTTTAAAGTTCAGTGTTCCATAGATGCACCACCTTCAGTTGTCTTTTCCCTGATAGTATTACGTGTAGAAGACGGACCAAAGTGGAACAGCTCAGTCGCAGAATCTAGAgttttacATAAGATCGATAATCATACTGATATATGTTATAACGTTACGACAGACCAAGCTGGTGGAATGGTGTCAAGTAGGGACTTTGTTAACTTGCGTCACTGGCAAAAGAGAGGCAAGGCGTATTTTTCGTGTAATGCAAGCGTCGAGTATCAGGACATGCCACCTGTCAACGAGCACATTAGAGGTGAGAATCATCCAGGTGGGTGGCTGTTTGCTGAAAACGAAGGCCATCACGACCAAACAGATTTTGTAATGTTGGTAAACACGGACCTTAAGGGATGGTTACCTCAATACCTTATCGATCAAGCCATGACAGGAGTCTTGTTTGGAACAGCTGATTGTCTACGTAATTATGTCCATTCTCAGAAGTAAAGCAAGGCGAGTGTGCCATAATTGTGCAGATAGGTGCTGAATGCAGCATTGCGCCTGACATCTTGCATGTCAGAATGTCTCATAGAGGTAAACGCATGGAGCATATTTGTTATTGATGAAGAAATCATCATGGGCAATGAATCTTCGCGTTAAAAGGAGTTAGAGTATAGAGCTAGAAATGCAACTGATATTCAGGTACGGTTAACTCAGTCAAGTTAGAATTCAATGTGCTTTTCTTTATTATGTTTTTGTTATATTAATTGTGgttagatttttaaaatgtgctTAACACATGACATATTAGTTACGTTTAGTTGTGTCTCTGGTTGAGGTCCGTGAAAATTTCAGAAGGATTGGTCGAGGATGGAGATCCAAAAAAGGGTAGCAAAATGACTGGGTATATAAGGACTGCTGAAAAATTATTCCATAATTCACAGACACCGGCAAAAAATTACAGGAAAGTCCAAACTGAGAAACAAAAATAGGCATCCTCACAGAAATATGAATAGTTAATGAAAATTTAGCCTTTTGTACGAATAGGTAACATGACTCGCAACCCCTTAAATCAAAACCAAAAAGTTAACAAAAAGTCCAAACTGAGAAACAAAAATGGGCATCCTCACAGGAATATGAATAGTTTATGAAATAGCCTTTTGTAATAATAGGTCACGTGACTCACAACCCCCTTAAATCGATTACCCCAGCGTCAAAATGAACTTCAAAAGCGAAAGAGCACTTTAATATTAGCCTTTCTAGTTGAGGATGAGCAAAAAACTAGGTTAagttgcagtgcattgtggaacTAATTTAGGGGATATGTTTCCAAGATGGCTTCTATTTcctcccctaaaacagccccacaatgcactgcaatgccaacttgacCCAGTTTCCTCAGTCATGGTACTGCTAATTAGTAAGAAAGCAAAGTTTCAGCTTAAAATGTTTGACCATAACTTGAAAATtctaatagaggctttgcaccgtcacgtgatggca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14849	StAR-related lipid transfer protein 3 OS=Homo sapiens OX=9606 GN=STARD3 PE=1 SV=2
Q61542	StAR-related lipid transfer protein 3 OS=Mus musculus OX=10090 GN=Stard3 PE=1 SV=1
Q9DFS4	StAR-related lipid transfer protein 3 OS=Danio rerio OX=7955 GN=stard3 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005237 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10457 all species →	MENTAL	Cholesterol-capturing domain	Domain	Interproscan
PF01852 all species →	START	START domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051869 all species →	Family	StAR-related Lipid Transfer (STARD3)	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR019498 all species →	Domain	MENTAL domain	Interproscan
IPR002913 all species →	Domain	START domain	Interproscan
IPR000799 all species →	Family	Steroidogenic acute regulatory protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46121 all species →	STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0031902 all species →	Cellular Component	late endosome membrane	Interproscan
GO:0099044 all species →	Biological Process	vesicle tethering to endoplasmic reticulum	Interproscan
GO:0140284 all species →	Cellular Component	endoplasmic reticulum-endosome membrane contact site	Interproscan
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22291	STARD3; StAR-related lipid transfer protein 3	-	Cholesterol metabolism	ko04979	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.