Gene detail

Detailed information of ENSQPTP00000044945.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031560555.1, ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000054223

tgatttttaatttttcgaaAAATGCTTTTACAAAATATCAAGTAAAAGTCAAAAATGTGGAAATAATCTTGGAATCCTATTCCTAGAGtgctattcattcatttaggATAAAAAGATCTACCTTATATtcgcaaaagaaaaaatatatatacgagTGATTGTATAGGGACCGCAAGGGCTCATGGTTagttttcaagatggcggacgagcAAGAATCTTCAACAGATATTTTTCAGGACCTTGATAGCCTTGTTTGGGGTCCAAATGTAAAAGAAGAAGTATTTCAAAGATGGACACAAGGGTTTATATTCAGTCCTGATGAACCAACTGCTCTTGTCCAGGAACAAGGTGGTCCCTGTGCAGTGATTGCTGCAGTTCAGGCTTATATgctgaaaaatatattattttgtgATGGTACTGATGCTTCATCAACAGACTGGAAGCATTTATCAGATGACCAGACCAAGAACATCCTCGTTTGTACCTTGTGTCAGATGCTTCAGATGGCCAAGGAAGAGGATGATAGTATAATATCTTTGGTTTTATTAAGAGATCACATGCTGAGTAATCTAAAGGAGCATAGTAGTATAGAAACAGATGACGGTACTTCCACATGCCGTAATTCTGaATCACCACAGTATCACAAATCAGTATGTGAACAGCAATTAAAACATCAATCAAATAAGGAAACTATTAATTTATTGAGtcAGACTCAATGCAACTCTTCCAGTGAAGCAAGATCTTtgatagaaagaaatattcatatatttgAAGGACATTTTGGAATTCTATTATTTCTATATTCTATGATTCTTACGAGGGGCATAAGTACCATAAAAGATGAAATGGGAGATCCAGGAGAATCTCTGGTGGATGAAAACTTTGGTTTTGGAAGCCAGACCTTGATAAACCTTTTAATGACAGGCCAAGCTGTGTCAAATGTATGGAATTTAAGTAAAGAAGTCAGTGGGTTAGAGTTAAAGGGCATTGCTAAGCAGTCACAAGTTggatttttaactttattagAAGCCCACAGATATTGTGAGGTTGGAAGTTTCCTAAAGTTTCCAATCTATCCCATTTGGTTATTAGGCAGCGAAACACATATAACAGTATTGTTTTCTACTAATCAGTCATTGAGTGGACCAGAATCCCCAAAAGAAGAGGCACAAAGGGTATTCAAATCATTCGATGAACAAGAAAATGGATTTATAGAAAGTGATAAATTGACTGATGTTCTACACAAACTTGGACTGGAAACAGATCCTGAATATGTAACATTCATGAAATCCAGACTAGATCCAGACTCCATCGGCATCATACTTCTTCCCAACTTCATGGATGAGTTTTTCCCAGGAGAGAGCACATCCCAGTGGACTGGTCCTTTTACAGTGTATCATTACAATGGTCTTGGGGTAAAGCAAAGTGATTCTCAATTACCTAGAAAGGTGATGTACTCAGAAGGTATTGCATGTATCGAACCAACAGACCTCAGTCATATTGCAGAAGAAGAAATTATCTCTTGTCTAAAAACTAAGTGGACAGGAATAACTGTCACCTGGCACTCCAAATACCCACCCTCTGTTAACTGAAAAAACtcataaatatttatcaatAAACATTTGGTGCAATCAGAATTATCCAATGCATCACAACATGGACCTTTCTACCTTATAAGTTGGTATATTATTTAAACGtttttgaattattcatgGCTTTCTCAAGTTTGTCAATAAACTTGCATACTTATAATCTCTTTATCAGGTTTAATATACACACATTCCAAAAAAGCATTGTTGGTTGGAGATCTGAAAATTGAAATGAGACAATTCATGGTAGTGGTTCCCCTTAGTTACTCTCACTATGTCACACAAGTTCAATAAATTAGCTAGAACATCTCTGAACTTAAAACCCTGATTACTGAAAATTGATTATAAATTGTTTCACTAGCTTACTGCCCGGtgaaaaataagagaaaattgCCTCGTAATccttgtattattatttttaaacaaatacCGTGTAGCTTATGGGACATAATTTTATAGGTTAACTGCCACAATGGTGTTTAGATAACTATTGTCCGAGTTGGAACAATTGACTTACCAGTGCAGGTCATTACTTAAAGGTGGTGCAAACCACTAATTAAAAAGGCAAAACAATTATCACTTCCATTCACATTCAAATTCACAGCTCACTGTGCACGATTCATTTCAtgtctcagatttcagatctctCTCGCCCATCAGAAGACAGTATTGATCACTTGGAAATATAATTCATATCTCTGTGCATCCATGCATTATTCTCTATTCATATCTCTGTGCATCCATGCATTATTCTCTATTCATATCTCTgtgcatccatgcatcattCTCTATTGGATGATTTTGTTCTCATCATCCTGAGTGAGCTGGAGACTTGGATATATGTAAACATTCAGATCTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0IIH8	Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Bos taurus OX=9913 GN=MINDY3 PE=2 SV=1
Q9H8M7	Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Homo sapiens OX=9606 GN=MINDY3 PE=1 SV=1
Q4R528	Ubiquitin carboxyl-terminal hydrolase MINDY-3 OS=Macaca fascicularis OX=9541 GN=MINDY3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008250 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13898 all species →	MINDY-3_4_CD	Deubiquitinating enzyme MINDY-3/4, conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025257 all species →	Domain	Deubiquitinating enzyme MINDY-3/4, conserved domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR039785 all species →	Family	Deubiquitinating enzyme MINDY-3/4	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12473 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0071108 all species →	Biological Process	protein K48-linked deubiquitination	Interproscan
GO:1990380 all species →	Molecular Function	K48-linked deubiquitinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22647	MINDY3_4; ubiquitin carboxyl-terminal hydrolase MINDY-3/4	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.