Gene detail

Detailed information of ENSQPTP00000045773.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031551246.1, arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000055051

ATGCCTGTTTGTGATTCTCTCGAGGCAATGGCCATTTGCCAGGAGGCCAAAAGATTCCAATCGTTTTATCCTCGAATTCAACAGCTATCCGAACTGCTAGAGCAAGTCGATAACGTTCCTTTGAAACGAAAAATGCGAGAATTGGTCAACGGTTTAGAAGACTCTCCAAGGTTTTTAGGGTCCAGATTATCGAGAATGGAATTATTTGagctaaaatattttcttaatatTCTCCAGGGTATTGTGGGGAGCTCAGTTTCTGGCAAGTCATTTCTTGTTCAAAGATATCTGACTGGTATCTATCCTAAAATGGAGTCTTTCAGTGGTAGATATAAGAAAGAAGTTCTTCATGATGGTCAAAGTCATTTGTTACTCATAAGAGACGAGACCGGTCCACCAGATCTCCAGTTCACTCAATGGGTTGATGCTGTGATATTTGTGTTCAGCTTGGATGATGAGCTAAGCTACAGCATGATCCCAGGATACTATGCTAAAATGGCTCATTACAGGAATATATCTGATGTACCTGTGATTCTGGTTGCAATGAGAGATGGTATCGATGACTCCTACCCAGGAACAGTAAGCATACAACGAATAAAGAAACTAATAAATGATATGAAGCAGTGTGTCTACATGGAAGCTTCTGCTCTCACTGGTGATAATGTGGATGCAATATTCCAGACAGCTATTGAGAAGTTAATCCAGTCTAAAGAAGTACCAGTACTAAAGTCCTATGATGAATTCCAATCTCCACTCCCAAAAGATGGAGATCAAAGCAATGTACTTTCCTCCAGTCCTGGAAATAGTGGGAACAATAGTCTGGTATCGACTCCATCATCAACTTCAAAACGATCAACAAGAAGGAGAACCATGTTATTTAGCTCgAAagataaaaaggaaaaggaggTTTTTCCAGACACAGATGTTGGCAGTGGACGGGATATTCCCATCAAGCAGGGTTATCTTTATAAAAGGAGTGCCAACTCAATGAAACGAGaatggaaaaagaaatatGTGACATTACTAGACAATGGAATGTTAGTTTACTATCCTAACTTACATgATTATATGGCagaaatacatgaaaaaacacTCAATCTCAAACACACAACAGTAAAGATCCCTGGTCAAAGGCCTCCAAAAGCATCAACAGCAACCAGCCAATCACAGGCTTCAGATTCTAGACCCACAACACCTGTCGAATTCTTATCAGAAAACAACAATAGCGGAAACGACTCTTTAGGAAAAAACTCTATCGTAATACAAAATGGTCTTGCGAGTGACTGTTCTCAAGTAGATGGACCTGTAGACCTTGATACTGCTCTTGCAAATGTAGGAAACCAAGCGATGATGCCTACGGCATCGACAAACACAAATTCGTCAGTGAATTCAAGTAAGGGAGACCCAAACGCTCCTAGTGTAgtcaagaagaaaaataagagaAGTAAACATACAAAATCATGTGAAATAGACTATGAAGAGCTTGAGAAAGCTTTGGCATCGGCAACCACTGGTGTTGCAGTGCCACCAATTATGAGAAATGACTCGCAGACTTCGAgtttgaagaagaaagggcATCGAAGAGCTAAGAGTGGGAGTGGCAGATTTGACACCGATACAGAGAATTTAGAATTCGAGTTTACCATAATATCGCTTGATGGAAAATACTGGAACTTTGAAGCTGGATCACAAGAGGAGAGAGATTCTTGGGTCCAGGTAGTGGAACAACAAATATTGACAAGTTTACAGACAAATGAGAGTGGAAAAGAAAAGTCCCGAATAAATAGTGCAAATTCAAATGAAGGATCCGATATCCAAGCAATCAGAAGGGTACCTGGTAATGATATGTGCGTGGACTGTGGAGCACTAAATCCGGACTGGGCGTCTCTCAACCTTGGTGCTCTGTTGTGTATCGAGTGTTCTGGTGTACACAGAAACCTGGGAACCCATTTATCTAGAGTACGTTCTTTAGACCTGGACGACTGGCCTTCCGAATACACAGCTGTTATGTGTGCCATTGGCAACGATCTGGCTAACGGTATTTGGGAAGGACGATGTAATGAAGAGGAAAAGCCTACTTTTACGTCATCaagGGAGGACAAGGAACGTTGGATAAGAGCCAAATACGAAATCAAACAGTTTTTATGTGAACTACCACCGTCAGAATTCTCTCTAGGCGAGCAATTAAACGACGCTGTTACCAAGGAAGATTTACCTTTATGTATATTATTACTGGCTCACTGTACGCCAAGTGACGTTAATACAGTAAATGATGACAGAGACAAGCTTACACCGCTACATTCTGGATGTATGCTTGGAAATATTGTCATCACTCAACTTCTTATATGGTATTTTGCAGATGTTAAAGCTTTGGATGCGAACGGTAGGTCACCCCTGTGGCACGCCAAATCTTCTGGAAGTAAAGAGTGTGCGGACATACTGCGATACAATGGTTGTAATGACTTAGGAACCTTAGTACCTCAAGCTGATGACGTCATACTATAG

Transcript

ENSQPTT00000055051

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BXK8	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Agap1 PE=1 SV=1
Q9UPQ3	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=AGAP1 PE=1 SV=4
Q6NRL1	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=agap1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002407 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF01412 all species →	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR001164 all species →	Domain	Arf GTPase activating protein	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR037278 all species →	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR038508 all species →	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR051282 all species →	Family	Arf-GAP with GTPase, ANK repeat and PH domain-containing protein	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45819 all species →	CENTAURIN-GAMMA-1A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12491	AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.