Gene detail

Detailed information of ENSQPTP00000046019.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: XP_031563385.1, A disintegrin and metalloproteinase with thrombospondin motifs 4-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSQPTT00000055307

aTATGGAAATATTTTGGATTGCAGCTTGTTTTTACATGTGCTATAATAACCGTCCTTCAAAACTCACTCTTCCATTTATGTTGTGCTTCAGTACCAGAATACGACATAACGTTTATTCAACCGCAACGAGGACGAAGGAGTATCGACGAAAACCGAAGGCATTACAAATTAAAAGCGTTTAATAAGACCTTTCAGTTGGAATTAGAGCCTAATGATGAGGTGGTCTCGCCGACTCTGGTTGTGATGAAGAAAAGGTCTGGTAACGAATGGACCAAAAATCTATATAAACCGAATGGAAGATTTCTTCAAGGTCACGTCGTTTCTGACCCGAACTCGCACGTTGCTGTTCGCGAGTTGCAAGACGCGGAAATGGTAAGGACTGGCACTTTTGTCATCGAAGATCATTTGTACAAAATCCATCCAATCAACGAACGCTTAAAAGGCATGTTATCCTTAAAAGGGCATGGTCATCACGTGATAACGAGACGGAGCATCAAGGATCCGAAGTCCGAGATCTTTCATCGGCAAAGAGTACGCAGAGATGGTGCTGATCCAAAGTATTACATTGAAGTCATGATGACAATGGATAAAGTGTCTTGTGACTACTATGGGAATGTGACTATAGACTTTATCCTTGCCGTGGCTAACATGgCGAATCGGTTATATCAAGATAAGTCTATCGGGATTAACGTGGCGTGGACGCTTACTAAAATAATATTGATACAAGCATATGAGGAGGGATTAGACGTAAACAAGCATAATGTAGAGTCAGCTGTGCAATATCTTCACGTGTTTAGTGCCTGGGCACAGAACAAGAACACTCCGGCTGGTCAGGTTGAGCACTTTGATAATGGAGTTCTCTTGTCAAGTCTTAGCAGGGGTGTTGCGGTGAACAATGCCATTGGACTTGATGCTGCCTTCTACGTGGCGCATGAAATGGCTCACAATTTTGGCCTCCCCCATGATAGTGGCAAGTGTGCCAAAGGATACATCATGAGCGCAGGTCAAGCGTACGGGCCAAGTGCTTTTCAATGGTCAACATGTAaaattgtCTTTAATGTTttatccgtccgtccgtccgtccgtccttcctccctccctcctccctcccttccttccttccttccttcctgccttcctgccttcctcccttcctcccttcctcccttcctcccttcctcccttccttcattcatttCTTCTTGTTATAACAATATCCCACCAGCCAATATCACTCTACCGAGACTACCTCCAGGCCATACGTTTGACGCAGATCAACAATGTAAATTTCTATACGGTCCTGAATACAGACAATGCCCTGTCACAACGGTGAGAAAAAtctcttttattttccttATTCTTTTACTTtgcatacacctatttcaaagaaCGTTGTCGGTCGGATATCTGAAATGGTGGTGCGTTGGTGGCTATTGTGTCGAAGTTGGTTCCAGTCTTCCTCCTGCTGTCGACGGTGGATGGGGTGAGTGGGGTCCGTACGGCGCATGCTCGCGAACTTGTGGAGGAGGATTACGTCATCGAACTCGTGTATGTGACAGTCCAAGaCCAATGCATGACGGGAAGCCTTGTCAAGGATCTGCCATTGGTGAATGGGAAATCTGTAACACACAAGTAAGTGACTTTTTATaCCCAAAGTCTGCCTGTTACTTATGGTGTAGGAGGGGAGCATCAGCGACAGGAGAAGGGAACGTTGCCGATGGCACCAAATACTCTGAGGACTTACATGTGCTTGATATTTGCATCTCGGGAAAACGAGTGCCTGTGGGATGTGATAACAATATTCGCTCGGGGAAAATTAAAGACAGATGCATGAAATGCAAAGGCAATGGTAGCACATGTGTTCGTATGGTGGGGAACTACACAAAACAGTGGAACAAATATGgTCCTGCCAATGCTGATCCCATGTTCGTAATACCAGCAAACTCAACGAACTTTCTtattaaagaaaaatcaaagacTAGGAATGTACTGAATCTCAAGGTATATCcaccggaaaaaaataaccTGATATTTTATCAACGCCCTACCAACTCATCCAGATCAGTAGCTGGTACAACTGTGTTTTATGATATCTCGAACAGCGATCTGAATCATGCCGAGTCGATGTTCTTCAAGGGACCGAACACGGTTCCTTTAGTTCCCATGTTCGTTTTTGTTGGTTCCGCCAATGTAGGCTATACTTATTCATTTTACGAGCCAGGACAAGCCCCTGATACGGCATTTATCTGGAAGACAGTGTTGAGTGGTGACTGCAGTACTACATGTGCTGGAGCTCAGACTGTAACATGTCATAGAGAGGATGACCAAACACAAGTAGACGAGGAATACTGCAACGCAACCACCAGACCTAGAAACCACGTTCCATGCAATGTTCAGCCATGTCCAGCCAGATGGGAGCCAGAGCCGTGGGGTATGTGTTCTCATCGATGTGGAAGCGGCAATAGAACAAGGCGGGTACCCTGTGTTCAACAAGTAGCACAATTCACTTATAGTGAAGTGGAATCTCGTCACTGTAACGCCAGTATTCGACCACATCGATCCGAACCTTGTAATCAAATAGCGTGTGGAGCTGCTTGGGCCGTTGATCATTGGTCTGAGTGTGTTTTAGTTAATGGCTCATTGATTGCCACAAGAACGGTGagatgtcaaaatattttggggaACGGTACGGTCATCAATGCTGACCCTAAGGAGTGTACTGAAGTTGATAATATTATTCTAAAATCTGTTAAAAACTGTACCTTCACAACAACAAGCACCAGTCCAACGAcagcaaaaggtaaagtaaggGACGGGAAAATTGGCACTACTGTGTACTGCGTGCGGCCTACTACATTCTTTAAATAA

Transcript

ENSQPTT00000055307

Protein

Uniprot

Uniprot term	Description
Q8TE57	A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Homo sapiens OX=9606 GN=ADAMTS16 PE=1 SV=3
Q69Z28	A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Mus musculus OX=10090 GN=Adamts16 PE=2 SV=2
O15072	A disintegrin and metalloproteinase with thrombospondin motifs 3 OS=Homo sapiens OX=9606 GN=ADAMTS3 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF19030	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR013273	Family	ADAMTS/ADAMTS-like	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan