Gene detail

Detailed information of ENSQPTP00000046625.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031556318.1, uncharacterized protein LOC116293064 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000056036

GTCTTGTGTTGCTACTGTTATTGTGAAGAACAGGACTTCAAAACCACAAACAATAAGGAGAGATTTTGCTCTAAAGATAGCAACTACGAGGATGGTGAAATATGTATCGCCGACGAAGAACAGAAATACTCACAGAAATCGAACGAAAACAAAGTTGATTTGGATGGTTTATCGATAGAATTAAAGTTAAAAGAACTTAATTTAAATAAATCAGTCAAACTAGAGAATTTAGGGATTAAGCCAATTGAACCAATAAAAGAATGGAAATCTGTAGAAATACCCGTATTAGAAGCAGTCAAGGTTGGTCACGTGCAAGACGTGGAGGTGATGCCTGGAGTGACACGACAGATCAAGACTCTGAGTGTTCATCCTCCAATATTTGAAATCCCTGAGTTTCTGGACCCACTTGAATGTGACTTCATTGTCGCTATGGCTGAGCGTAAAGGGATGGCACCGAATACGAAGCCAACTTATAATGAGGGGATAACATTTGAAGACCCTGAAAATACATTCAAGACGTGGGATTACGATAAGAATGGCTTCATTGATCCAGAGGAGATTGTATTACTTCCCGGTAAAATCGATCTCAGGTTCTCAGAGGAAGATGCTCAGCAGATGTTCAATGACCTCAAGATGGACGAAGATCACAATGGTAAAATCGACTTGGAGGAGTTCAAGAATACCGATCTACTGAAGATAAAGGAGTATATAAATGAGCGCCTGCAGGACACGAGTCAGCGTCGCAACGCTACAAGTGAGCAGGCGTGGATATGGCATGATGAAGATGAGCTACTACGATACCAACCAGAACTGCTGAACCGCTTCCATGAAAGGCTTGAAGCTGTCACGAAGATACCCAAAGAAATTGTTAAAGAAAGCGAGCCGCTCCAGGTCTTAAAGTATGAAAAGGGAAGCTACAACTATTGCCACCAAGACTCTGAACCTAATGTGGGTACAATACCATGCTGTCAGTACGGTGATACCAGACACTGTAGATTATGTAGGTTTATTAGCATATCTTATTTTCTCAATGACGTAGAAGAGGGTGGAGAGTTGATCTTTCCTCACGCTAACAGCAGATTTGAGGAGGGCATCATGCTCAACTCAGGCAACTGGACAGGATTCTTTAACTTTGCAAAGACAACTGGAAGTCGTAATATGTTTAACGTACAGCTGACCTTTAAGACTGAAGGCGCTAATAACATCATCCAGGGCAATGgaaccgatgaaagtggaccTTTTGAGCTGGTCGACAGTCTGGTAGTCGACGATATCGTCAGATTTCGAAAGCGATACACGGATAATAGCGAAGGAGAGTTTGTTGTTAAATATGCTGGACGAATAAAGAGTGGAGCAACAATAGAAGGCAAGTGGTGGGTCCCAGGCCACCAGAGAATGAACGGTAACTTCTTCATGTACAACACTGAATACGAGcGATGGATGGATCGCCAGCTCCAGAAGTGTGACTCAAGCGCCTACTGTCCAAAGGGTCAACTGGTTATCAAACCTAAAAAAGGTACAGCTATCATGTGGTACAACCATAAGATCACTGAAGACAAGTGGATTGGACCCCTTGATGACAAGAGTTACTATGGTAACTGTGACGTCACCAAAGGTGAGAAATGGATGGCGACAAACTGGATTAATGTGATTGGTGACGGGAACATGACAATGACAGCATGGAAAGGGGGAAAAAACTGGCTGTCAGTCTTGAACAGAGAGAAAGACGAACAATTCTTTCAGAAAATGTTCACAAGTGAAGCAAAGCAAGAAGATATAATTGAGCAAATGTTTAAGAAAGATatgaaagagaaaatgaatccaTCGGATAGTAAGCCGCCAGAGCGACATGTGTTGAATGCCGTTACCTCGTTACTAGAAGTACTAGACTATAAAGAAGTGGCAGAAGTATCTAAAAGAGTTCATCAGAAACTACACATGACGTGTATTCCTCTTGTACTCAACCAGGAGGGTAAAATACGGATCGTGGATGGAAGCAAAGCTGATTGAATCAAGAACAATCAACACAAGAAAACTGTAACAGCGTTAAACGCTAACGAACAATGATACACTGTCTTCTAGTGTGAAGGCACTTCTTAATAAAAGATTATATACCAGCCCAGGGAATAAGGGCAGATAtgttaaatattttgtaaataaaagGTTTTTTAAGGCTTCGCCCATG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008617 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR045054 all species →	Family	Prolyl 4-hydroxylase	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10869 all species →	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004656 all species →	Molecular Function	procollagen-proline 4-dioxygenase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0018401 all species →	Biological Process	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000046625.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.