Gene detail

Detailed information of ENSQPTP00000046729.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031574148.1, tetratricopeptide repeat protein 17-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000056154

ATGGTGGTGCTAGTCGTTCTTGATTGGGAAACTTTTAGCCGTTTTTTCAGTATTTTAACAGCCTGGATACTATTATCTTTGGTTGTATCAGGCTGTAATGGGGCTACACATTGGATTGTTACTGAAAATGGTCGTATTGAGCAGCAGgccaattctttttttaatcttcAAAAACCATTTGATTTGGTAGCATTTATACAACAAGAACAGCGACTTAATCAAATGAATATTCTGCAACAAGAcctaaaacaagaaaaacaaatcctTGAAGAAGCAAATGAGCAAGAACAAGCGGACATAACAGAGACATTCTTCAAGACTGATTCGGCATGTAAAAAGTTGAGAAGATTGCATGAAATGGACCTTAATTTGAACCATGTTATTTCATTTACCAGCAAAGAAATCAATATCAATGACCACATAGATGTGAGCCTTACAATATCAAGAAATATCAAACTAAAGACTCCAGGTTGCCAGAGTAATCTGCCATATACCCTACTAACATTTGATCATCTTGCTGGGATAGCAGAGAGACACAGCCTACCCAGTACCCTTGAACCAACACTGTTGTCTGTGATGTCCTATGTTACTGATATAGACCACTGGGGTCATAAGGTTGCATGTGCACTTGAAAAGAATTCTAGTTCATGGGTTTTACAAAACATGGCAGCATTATTCTGGCGTGTTAAAGGGTACACTGCAGAAGCTGCTAACTGTCTTAGACAAGCATTGTATAATTCTCCAAGAAAACACAGAGATATGGCCCTGTTTAGCCTGGCTATCATTCTACATCGTGCAAACTATTCTATGGATTCCATTATCTTACTGCACGCTTCTATAGAAAACACTTCTCATCTTGCTTTACATCATCTTGTACTTGGAGTAGTTTATGCATCACTAGGGCAGTTTGATATGTCTGAGCTGTGCTTTCAATATGTTATTGAAATACAACCTGACTTTGCTCCAGCAATGGAACTGCTAGAGGCTGTAACATGTGAGAATAGATACACGCAGGCCTTGAAAGATCAACATAGAACACTGAAGGAGTTTGTTGGTAAGGTGAAAGCATTTCACCACAGACAGCAGTTGATGCAGAAGTTGAGTGTCATGGATCAGCATACAAAAGATATTCCTTTAGAACAATTTACAAGACAGCTTCGCTGGTTCCAGAAGAATCTTGTAAAGAGTAACTATCATTTAATAGAGATAAACCAGGACTCCACTATTGTGCAAATGAATTCAAGAAATAGAGAAACAAGACAGGAGCAAGAACAGATTGTTCCCTGCAGCAAAGAAGATACAGTTGACAGTTGTACCAGGATTTCCAAAACGAGAAATGAAAATGTCGAGAATGGAAAATTTTCAgtgaaaaaagggaaaaaaacaagTGCTGCAGAAAATATGACATCAAATGTCATACAATTGAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCCGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCCGTAGTCCATCCAGTGGTCCATCTAGTGGTCTATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCACCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCGTCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCTTCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCTATCCAGTGGTCCATCCGGTGGTCCATCCAGGAAttacaaaaaagaagaattgaCTAAACCACATTCTCATCAGAACAGTAAAATTCCTGTTGTAGCTAAAAAAGAATCCCATATAAACCAGAAACGAAAGTTGTCAGAAAAGGAACAGTCCAAGGATAACGAACAGGAGTTCCAAGATGAAAAACCAGTTCAAGGAAACCCAcgttacaaaaaaataagagcGTGTGTGTCACCTGATAAGGGATTTCAATCAACATTCAACCCTAATGACTGTAAAGAGTCAGACAATTTGGAAGTACTAATGAAAAACGATAAGTTTAGTGTTGTCACCAATTTTGCTTCTAAAGGAATTGATGTAAAGAATCATGTTAACTTCAATGAGGACATAAGTGATATCCCCAAACCTCCTCGGTGCCTTGCTAAGATTCAGACTGGGCACCAGTCGTTTGATCATCTAAAGGGTATCAAGGCTTTGGGTAAGATAAACCTCCCACCAGAAAATGGCATAAAGCAGACTCTCCTTATGCACGCCTTGAATCCGGGAATGTCTGTTGAAGAAGTAGGAACAAGGATCCATAGAGCACTTAAAAAGAACTCCACCTCATGGGTGTTACTTAACCTAGCCTCCATCTACTGGCGTATCATGGGTGATACCAATGAAGCTGTTCGCTGTCTTCGCCTGGCTCTCATCAACTCGCCTTCTAAAATACAAGATGTTTCGCTGATTAACCTGGCAAGTATTTTGTTCAAAGCTGGTTTCTTTGAGGACGCAGCTACAATAAGCACTGCCGTGTTAAAGATATCTCCAAATGCAATGATTGCGCATTTTACATTGGCTAATAGTCTTGCTGGTATGGAAAAAATCAATGAAGCAACACAGCATTTCCTGATGGTGCTACAGATTGAACCAGGATTTATGCCAGCTGTCGAACGGCTGAAGACCATCCAGTGCATACTGTGGAAGCAGCAGAAAGAACTTGAGAAACAGGCTGAAGAACTGAAACTGTTGCTAAGCAAAACACGTGACCCATCACGTGACCCAACTGTGTAA

Transcript

ENSQPTT00000056154

CTAGTGAAGTCAACACTGAGCCATATAGAGATAAACATGGTGGTGCTAGTCGTTCTTGATTGGGAAACTTTTAGCCGTTTTTTCAGTATTTTAACAGCCTGGATACTATTATCTTTGGTTGTATCAGGCTGTAATGGGGCTACACATTGGATTGTTACTGAAAATGGTCGTATTGAGCAGCAGgccaattctttttttaatcttcAAAAACCATTTGATTTGGTAGCATTTATACAACAAGAACAGCGACTTAATCAAATGAATATTCTGCAACAAGAcctaaaacaagaaaaacaaatcctTGAAGAAGCAAATGAGCAAGAACAAGCGGACATAACAGAGACATTCTTCAAGACTGATTCGGCATGTAAAAAGTTGAGAAGATTGCATGAAATGGACCTTAATTTGAACCATGTTATTTCATTTACCAGCAAAGAAATCAATATCAATGACCACATAGATGTGAGCCTTACAATATCAAGAAATATCAAACTAAAGACTCCAGGTTGCCAGAGTAATCTGCCATATACCCTACTAACATTTGATCATCTTGCTGGGATAGCAGAGAGACACAGCCTACCCAGTACCCTTGAACCAACACTGTTGTCTGTGATGTCCTATGTTACTGATATAGACCACTGGGGTCATAAGGTTGCATGTGCACTTGAAAAGAATTCTAGTTCATGGGTTTTACAAAACATGGCAGCATTATTCTGGCGTGTTAAAGGGTACACTGCAGAAGCTGCTAACTGTCTTAGACAAGCATTGTATAATTCTCCAAGAAAACACAGAGATATGGCCCTGTTTAGCCTGGCTATCATTCTACATCGTGCAAACTATTCTATGGATTCCATTATCTTACTGCACGCTTCTATAGAAAACACTTCTCATCTTGCTTTACATCATCTTGTACTTGGAGTAGTTTATGCATCACTAGGGCAGTTTGATATGTCTGAGCTGTGCTTTCAATATGTTATTGAAATACAACCTGACTTTGCTCCAGCAATGGAACTGCTAGAGGCTGTAACATGTGAGAATAGATACACGCAGGCCTTGAAAGATCAACATAGAACACTGAAGGAGTTTGTTGGTAAGGTGAAAGCATTTCACCACAGACAGCAGTTGATGCAGAAGTTGAGTGTCATGGATCAGCATACAAAAGATATTCCTTTAGAACAATTTACAAGACAGCTTCGCTGGTTCCAGAAGAATCTTGTAAAGAGTAACTATCATTTAATAGAGATAAACCAGGACTCCACTATTGTGCAAATGAATTCAAGAAATAGAGAAACAAGACAGGAGCAAGAACAGATTGTTCCCTGCAGCAAAGAAGATACAGTTGACAGTTGTACCAGGATTTCCAAAACGAGAAATGAAAATGTCGAGAATGGAAAATTTTCAgtgaaaaaagggaaaaaaacaagTGCTGCAGAAAATATGACATCAAATGTCATACAATTGAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCCGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCCGTAGTCCATCCAGTGGTCCATCTAGTGGTCTATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCACCCAGTAGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCGTCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTGGTCCATCCAGTAGTCCATCCAGTAGTCCATCCAGTGGTCCTTCCAGTGGTCCATCCAGTGGTCCATCCAGTAGTCTATCCAGTGGTCCATCCGGTGGTCCATCCAGGAAttacaaaaaagaagaattgaCTAAACCACATTCTCATCAGAACAGTAAAATTCCTGTTGTAGCTAAAAAAGAATCCCATATAAACCAGAAACGAAAGTTGTCAGAAAAGGAACAGTCCAAGGATAACGAACAGGAGTTCCAAGATGAAAAACCAGTTCAAGGAAACCCAcgttacaaaaaaataagagcGTGTGTGTCACCTGATAAGGGATTTCAATCAACATTCAACCCTAATGACTGTAAAGAGTCAGACAATTTGGAAGTACTAATGAAAAACGATAAGTTTAGTGTTGTCACCAATTTTGCTTCTAAAGGAATTGATGTAAAGAATCATGTTAACTTCAATGAGGACATAAGTGATATCCCCAAACCTCCTCGGTGCCTTGCTAAGATTCAGACTGGGCACCAGTCGTTTGATCATCTAAAGGGTATCAAGGCTTTGGGTAAGATAAACCTCCCACCAGAAAATGGCATAAAGCAGACTCTCCTTATGCACGCCTTGAATCCGGGAATGTCTGTTGAAGAAGTAGGAACAAGGATCCATAGAGCACTTAAAAAGAACTCCACCTCATGGGTGTTACTTAACCTAGCCTCCATCTACTGGCGTATCATGGGTGATACCAATGAAGCTGTTCGCTGTCTTCGCCTGGCTCTCATCAACTCGCCTTCTAAAATACAAGATGTTTCGCTGATTAACCTGGCAAGTATTTTGTTCAAAGCTGGTTTCTTTGAGGACGCAGCTACAATAAGCACTGCCGTGTTAAAGATATCTCCAAATGCAATGATTGCGCATTTTACATTGGCTAATAGTCTTGCTGGTATGGAAAAAATCAATGAAGCAACACAGCATTTCCTGATGGTGCTACAGATTGAACCAGGATTTATGCCAGCTGTCGAACGGCTGAAGACCATCCAGTGCATACTGTGGAAGCAGCAGAAAGAACTTGAGAAACAGGCTGAAGAACTGAAACTGTTGCTAAGCAAAACACGTGACCCATCACGTGACCCAACTGTGTAAAAGAAAACCTATTAAACATTGTTATGTATTTGTATTGTAATATTAGCCAACGTTCCTTGAATGTTTCTAAATGAATAGTTCGCTATTTGACTGgttaatcaattttttttccatctatccctttttccttccttcattccttatCTCTATCCTTCGTTcactcttttcttccttttacATCTATTCTATTTCTTTGCAAAACCCCCTTGTAGTATGTCTATTGGCATGCATGCAtccttcattcctttcttGCTCTCAGCCTTGAATATTTCAAACCCTTGATATAATAGTAGCCACCCTTCACAATGTTGGAAATAAATTATGAGGAATTGGAAATTCCCTTCCACCCCTTTGTTTTCTCATGCACCCCACCCTtccaataaataatgaatgtcCTTAAACTCTAACATTTGGCCAAGGCGTTTGATTTTGGTATACAATTAACAGGCGTTATGTATAGTATACAATACAACataactttatttatctttGAATTAAAGATAGCAAGGACATGCTAATATCTCCAAGCAATAAATTCTAAactaagataaaataaaataataaaattacaCAATTCCAAATAAAGTAAATctatgtaaaaatatatatataataaatttttataaatatattaaatttaaaaaaattaaaattattatccACTACAAAAGGTACAACAGTCAATGTCAAATTTCTTTTGGAAATTTCCGATTTAAATTTATGTATTTCATGAATCAATCTCATGTTGTTAGGGAGAGGATTCCATAACTTACTACCCTGATAAGCCAAAGAATGAAGACCATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7F211	Tetratricopeptide repeat protein 17 OS=Danio rerio OX=7955 GN=ttc17 PE=3 SV=1
Q96AE7	Tetratricopeptide repeat protein 17 OS=Homo sapiens OX=9606 GN=TTC17 PE=1 SV=1
B5DEL3	Tetratricopeptide repeat protein 17 OS=Rattus norvegicus OX=10116 GN=Ttc17 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006530 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176 all species →	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052630 all species →	Family	Tetratricopeptide repeat protein 17	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16091 all species →	TTC17 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0030041 all species →	Biological Process	actin filament polymerization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24931	TTC17; tetratricopeptide repeat protein 17	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.