Gene detail

Detailed information of ENSQPTP00000047151.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031572929.1, mediator of RNA polymerase II transcription subunit 8-A-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000056639

TTACTTGACCAAACTGGTTTTTCTCTTCGTGACCCTTTGGCCATAGTGCAAAAATGGCATAGCAAGTCCCTAAGGCGTATCCTACCAATGCTAAAGTAAGTAAAATCTTGCAATATTTCTCAAAACGCTTAGACACTTtccgtccgccattttgaattctaGCCATTTGTACGCATGCTCTTCAAGAACCGCTGATCAATCTTTGAGCCTGCtttcagttttcaaaattaattttcttttcaaatttcGGTTCTAAATTTGTCTTCAAATTTGTGAATCTTATCACAAGTACTGAGAGAATGAAGATGCAGGAAGAAAAACTGATCGAAGCCTCTCTTGGAGCGATCTCCAGTCGGGTCCAGGAAGTCAAAGATTCTTTACAGGCTTTCTTGGCCAAACTAGAAATGGAACAAATGAATTGGCCATCAATGCTAGATAACTTTGCTCTTCTATCGGgTCAAGTCAGAACTTTAACAAAACTACTAAAAGGTGACAAGACACCTCTACTAAGAGACCTTGTATTGCTTCCCATTCTGGTGCAGCAAGAAACTGACCCAGACATACAGAAAGCAACCCAAGGAAGAATACAGGCATTTAATCATGAAGTGGTTCCAGATTATTTACGAACAAAGTATGAACCTGAAGTCGAAGAATATGAACAGAAATTAGTTGCTGTTGCCTCAAACTTAAATCCTGATTCTGCACAgAGACAAATAACTCAGTTTAATGACATCATTGGTGGTCTAACAGACATGATTACAAATGCCAAAGAAGAATGGGAAGGTGAACAAAACTTGGCTGCAAGAACAACACCAGTAGCCAACCCAGACTTAGACAACCTAGTTGCAGCCATAACGTTTGGAAAAGGAGTAAAATCAACAAAGGCAGCTAATAGCAAATCAAAATCTAAAGGATCTCCAGGAACTTTTGCAGATCAAGGTACTTCTGGGTGGCAAGGCTCCAAGGACCAATCTGGCAAAATGTCAAGCTCTGTCAAAAATGAACTCAAAGCAGTATCTAGTCCACATCCATATGCTGCACACCCACCAAGTAGAACAGGAAGTAGTCATTCATAAACTACATTCATTTTATATGTTTATAAAAACTCCAATGTATAtagatattatatatattttaggtTTGAAAATTAATGTCTAAGTCTATACTTTACAGTAGGTAGCTaaatataaaatttgaaggttatGGTGtatgaaataattatttattttaatctctagataaataaaataatatttcaacTCTTTTTCAATGAATGTTCTTCTTTCCCCAATGTTCTGAAATAAGTAAATTTCCAAGAAGCctagaaaaaatatacaaaaaataagtaatactaatattattatttaataagTTACATGTACTGCTATTTTGAGCCACCAAAACAGGTTTAATATTGTCGGCTAGTTGGGAGGAAATATGAATCTGGTATGGGATAATTAACACTGGGACCGAGGGAAACAGTATGTTTTGTGGCTCCGCCTTGGGAAACATCAGCGGTCGAGGGACCACAAAACATACTGCTTTCCCGAGGTCCCAGTaaataagtgctttattatcataccaagtgtcaaagagaataaaacaaaaatgaagaaatgaataATGATGTTTCGTGAAAGAAAAAGTGTGAATGAATTTTGCAAAGGAGCGCTCAAatgtgtttttatattttttcaatcgCGTGACTTCCGGTTTTGTTATTCCCAGTCCATAACATAATATTCCCCTCCCAGAATGGTCGCCAAGAAACTGTCGAATTTCTTCACGTTCACGTGACACACTCTCGAACAATAGAAATTGAGGAAAATTGAACTTTGACACTTGGTATTTAATAATactgtatatttttttccaacgACATCAATATAAACCCATATTGGTGGCTACATTGCAATAAGGATCACGATTCACCTATCATGAGGTAATAATTCTAAGCCGACAATATGGGTTCGTATTGGCAGCTTTCTTCCGATTAAACTTGTATGAGAATTGTGATACTATTTAATATATTCCTGTGTAAGCATTCATTGCATGAGGGAttggtttttggtttc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96G25	Mediator of RNA polymerase II transcription subunit 8 OS=Homo sapiens OX=9606 GN=MED8 PE=1 SV=2
Q5HZZ6	Mediator of RNA polymerase II transcription subunit 8-A OS=Xenopus laevis OX=8355 GN=med8-a PE=2 SV=1
Q6DD30	Mediator of RNA polymerase II transcription subunit 8-B OS=Xenopus laevis OX=8355 GN=med8-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004951 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10232 all species →	Med8	Mediator of RNA polymerase II transcription complex subunit 8	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019364 all species →	Family	Mediator complex, subunit Med8, fungi/metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13074 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0070847 all species →	Cellular Component	core mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15129	MED8; mediator of RNA polymerase II transcription subunit 8	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.