Gene detail

Detailed information of ENSQPTP00000049102.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031556319.1, transmembrane prolyl 4-hydroxylase-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000058932

ATGCTTCTTACTAATAAAAGTTACCAACTGCTTAAACATTTCTCGATAGAAATCCCTGACTTTTTTACTGCCGACGAGTGTGACTTGGTTATTGAGATGGCTAAGAATAAAGGCATGTCAGACAGTCCTGTCATGGAGGATCCACGAGGCCTTCCTAATGACACTACTAAACAAGTGTTTGATGACTGGGACACTAATGATGATGGCTTCATTGATCCAGAGGAGGTGATATATTTACCAGGAAAAAGTGATTTGTACCTCACAACTGAAGATGTCACCAAAATGTTTGCTGATCTTGCAATAGACAAAGATAGCAATGGAATGAAGAAATACTTTGATGGTCTGAGAAACACCAAGTCACGGTTACGAAGCAGAAATACTCAGCAAACCTGGTTATGGCACGACGAGGATGAACTACTCCAGTACGAAGACCTGCTGGAAGATTATCATGAAAGACAATCCTTAATGAGAGTAGATGTAGAACACTACCAACAGCATGGTCAttatcactgtcatcatgatTCTGAGGTTATCAACACAGGCCTCCCATGTTGTACATATGGGGCGTCAGAATGCAGGTTATGTAGATATCTTACTGTCAGTATATTCCTAAACGACGTTGAAGATGGTGGAGAGTTGGCCTTCCCTGTAGCAGACAATAATACATTCAACTGGGAGGTTTGGACAAAGGAATCTTTGACCAAGTGTAACCTTGCCAAACACTGCTCTGAATCAAACCTCGTTATCAAGCCAAAGAAAGGCAAAGCTATATTATTCTATAATCACCTGCTGAACCACAAGACTCGCTGGCTCAGTGCAGTCGACCCAAGAGCGTTAGTTGGCGGCTGTGACGTCAGGAAGGGAGAGAAATGGATAGCTAATGCATGGATTAATATTAACGGTGATGGGATAAATGACTTGATATCATGGAAATCAGCCGCGAATTGGATGTCGGGAAATAATAGGAATGATGAAGTGATAACTGCATTGAAACGAACAGATACTGAAGAGAATATTgacgaagaaattgaaaatagATATACTCTAGAAAAGAACATACTGAGGGCTCCCACAAGTAACAAGATAGAGGaaaatgtacgatatacaAAACAATCCACACAAGAGCAAGATGAGGAGGAAGAAGGTCCAACAGGACCTATAGCACACTTAGGAAACACACCAGCACCGTTACCGTTACCATTAGAAACGGTGACTGAACCAAAACCACCAACAATGGATGACCCACCCATCCCCCCACAGGAGGGATATCGGGTACTCAGATCAATAATGCTATTAATAGATGAACTGGATCAAGTTGAGCTTGAGATCTTAGCAAGAAACTTACATTCGAAATTAAAACTGGTCTGTGTACCTTTAATAATGAATCCTATGGGAGTATTGTTGATGTTTCAGATTGGATACAAGCGTTATTATAGCATATTTAAAGCTACCGCCAAACAAGATAAAACACACTCAAATATAATTACCATCAGTTCTAAACCACCTATCTTTGAAATCCCCAAGTTCTTGACGTCAGAGGAATGCGATCATCTTATCATGTACTCTAAACGTGTTGGATTCAAGCCCAGCCCGCAAATAAAAGATTCAACAGAGATCAACGAAGAGACTCCACAGAAAACTTTCGATATTTGGGATTATGATAAGGATGGTTTCATAAGTCCAAGAGAGGTATGCACTAGATATAGACTACTAGGCCCCGAGAGGGACGCAATGCACAAGGAAGGGTCACTAGAGTTCCAAAAGGTAACAGTTCCAGCCATCGTGGAATACTTTGATGAGTTGAGAAGAATTCCACGCATGCGCAGTCGTAACAGCGAGCAGGCCTGGATGTTTCATGATAATCCCAAGTATCCCTTACTGGCTGACTTTCACGGAAGACTAGAACGTTTGACAGGATTACCCATGCATGTTATACGTCATAGCGAACCAGTACAGGTGGTTAAATATGGCGTACATGGACACTACCACAGCCATCACGACTCAGATGATGTCAATAGTACAGTGCCTTGTTGTACTCTACATAGAGAGGAAGAGTGCCGGTTATGCAGGTACATAACTGTACTCGTGTTTCTGAACGAACCGTTAGAGGGAGGTGAAACAGCATTTCCTTTCGCTAATAACAAGACATTTGATCGAGAAGCTTTGAAGTCTGAAGGATACAAGTTGAATCTAGCGAAACACTGTCATGATGGGAATCTGTACATTAAACCCAAGAAGGGTAAAGCGATTATGTGGTACAACCATTACAGGGACACCAATACAGGTTGGCTTGGTAAGCTGGATGAGAGGACATATCACGGtggatgtgacgtcattcaaGGAACAAAATGGATAGCAAACATGTGGTTGGACGTAATAGGAAGTTCTGGATCCGAGGAATCATTCAAAGGATGGCTACATGCTGACGAGGGCATGGATACCCTTCTTAAaaccaaaacagaaaaaaagaccGAAGACGATAAACCAAAAGAAGAACTATAG

Transcript

ENSQPTT00000058932

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NXG6	Transmembrane prolyl 4-hydroxylase OS=Homo sapiens OX=9606 GN=P4HTM PE=1 SV=2
Q8BG58	Transmembrane prolyl 4-hydroxylase OS=Mus musculus OX=10090 GN=P4htm PE=1 SV=1
Q6W3E9	Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=P4ha3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000200 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640 all species →	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123 all species →	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR045054 all species →	Family	Prolyl 4-hydroxylase	Interproscan
IPR044862 all species →	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR006620 all species →	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10869 all species →	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004656 all species →	Molecular Function	procollagen-proline 4-dioxygenase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0018401 all species →	Biological Process	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	Interproscan
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016705 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418 all species →	Molecular Function	L-ascorbic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06711	PH-4; hypoxia-inducible factor prolyl 4-hydroxylase	EC:1.14.11.-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.