Gene detail

Detailed information of ENSQPTP00000049115.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559820.1, myotubularin-related protein 13-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000058946

ATGTCTCGTCTTGCCGACTACTTTGCCGTTGTTGGCATCGACAAGGACTCAAGTTTAGgtgACGAGATAAAAGGAAAAGTGCTGCAAAGATTCCCAGCTCAAGACCGAAAAGATGTGCCTTTTCCAGAAGGGATTGAACTGTTCTGTCAGCCAAGTGGATGGAAAACATCCTATTTCATCAAGCCACACACCTTCTTTGTTTCCGTCCTCACAGACATGGATGGATTACACAGTTATTGCGCCTGTTTTACCTTCTACGAACCATATACtccaaaccaaaaatataCCAAAAGCTCTAAGAATGAAAGCATGTCGGATACCTCTTCTGTAAGAACAATACCAGACAGCAATCCTGGGATATCATTCAATAATGAAGATTTATCTCTAGATGCTTATGTTCCAAAATGTTTGTGCTTGGTGTCGAGGGTGACATACTTCGAAGTTCTCAAGAATTGCCTCACAACAGTCTATCTTTCCTTTCTATCGGGCAACAATACATTGCTAGAAAAACTTATTGGATCTATCCTAGGATTTGTCAAAGTACCTCCACCAGGAGGGCCTAAGTTGACATTTTCAATTGGTGCTGGTGACCGGCAGACTCTGTGCCCGCCTGTTTCAGAGACAATCCCAGTCACTGAAAAAAGTGTCGCTGTTCTGTTTCAGCAGATAGGGATTCATAACATGATGTCATTGTTCTGTGCCGCCGTCACAGAGAACAAAATTCTTTTCATGTCTAGCAGTTATGTTTTGCTTACCAATGCAACAAGAGCCATGCTAGCACTAATGTATCCACTAAAATTCAGCTATGTATATATTCCAATTCTTCCATCGGATCTGCTTGACTTTCTAAATGCACCGACTCCATTCATCATGGGAGTACACGAGCACTACAAGGACAATATTCCTGACCTGTCTGATGTGATACTGGTTGACATTGATGGTGGTCATGTACATATACCTGATAGTGTACATCTGGCGACATTACCTGAACCATTCCTCGGCAGAACAAGAAGAGAATTAAACCTAGTTATGAATCCTCAGCTGGTTAATGCTGATTACGTCTTTCAAACTCCTGTATCGCCGTCACCTTTACTGTTACAGGACAAGGAGATCAGAGCTATCTTCATTCGTTTACTTGCCAGAACATTAACTGGTTACAGGTCTTGTTTAACACTGATAAGAATCCATCCCAAGCCAGTTATTACCTTTAATAAGGTAAGATTCCTGGAGCAAAGAGTCATGATTGGAGACGAATTTCTTACAAGGGTCCTAGATAGCATTGCCTTCTCAACGCTTGTGGTCAACAGAGGACCACCTTACCGCTCTTGTGATCTGTTTGATGAGcTTTGTGCTGAGATAGAAGAAATCATTCAGAGTGAGAATGATGTCGACGCTGACATCCTGGCCAACATACAACACATCGCCAGAAAACTGTTTGAAAATGAACCAGCATGTGATAATTCAGAAAACCAAATCCAGAATACTCTTGATGGTATTGATACTGAGGTCTGTAAGAAGACCCTCTTTCCTCATCTTGATCAAGATATAATCAACCGGTTCATCAAAGAAGAAGCATCCCATGTGGAACATTTTCAAGTCATCAACAGTGAACCAAAAATCGTGCCGTGCAGTACTGGTTCATACAGCCGACAGCAGCATTATATTCATAGTAGGAAACTGGAAGTGCTGAAGGACTGTGTGACATATATCTTTGATAACAAGATATCAGAGGCTAGAATGGCTCTACCATCAGTGCTTCGATCTCTGAAATCCAAAGGTGCACAACTAGCTCTGTGTCATGAACTATCACTACGAGCCAAGCAGAATAGATCTGTACTTGAGCATGACCAGTTTGACTTGGTAGTTCGACTGATGAACAGTGCTCTACAgtcGGACGCTAGTATGGATAACACCGCAGTTGCCGCTGCATTACTCCCTCTCACCACTACTTTCTGCCGAAAACTTGCAACTGGGTGCATTCAGTTTGCTTACACCGGTGTCCAAGACCATGCTATCTGGGAGAAGCAACAGTTCTGGGAAGAAGCGTTCTACATGGACGTACAGACACAAATCAAACAGTTATATATCATAGACGAACCTCCCAAAGCTAACGAAGAAGACACTCtagaaaaaccagagaacagATCTTCAAGAAGCAGTCTTACTCCCTCAATGAAACACAGAAGTTTATCCACCAAGGATTCATCAGGGAGAGATTCCGGGGACTCGACGGAAGATTCTAAAGTTGCCCTGAAACCTGTGAATAGATCACCACCAAATAAACCGCAGCCCAGTGCTCTGGACATTGCTGCAGAACAGCTCAAGCGCTGGCCAAATATGGCCCAGAAAGAGAGGACCAATTTAATGTCTAGCGAAGAGAGTATTGTATATAGCCAAGCCATACACTATGCTAACCGTATGGTATATATGAGAATACCACTGAATGCATGTGAATTAATGCCATCAAGAACGCGTAATCAGGCCCCACACGCTGCAGGTGCCACAGGGTCTATAGCTGGTCGTGAGGGGTCAGTCAGTGGTGTGTATACTGCTGATGGTGCCGTCACTAATGGAGAAGTCGCAGGGGATTCAGCCAATAGTGTGACAGATAGTGGCTGGGATAGCTATCTTGATGACGAAGAGGAAACCATCGCAGACACTGTAACAAAATTTGTGTTACGATTCGTTGATCGGGTTGGGACAGAAGCTGGGATCAGGACAGAACACATGAAGTCACTTTATGCAATGATTCCAGGTGTCGTAGCCATGCATATCGAATCACTAGAGCCAGTGTGGGCACAGTACAGGCGTTTAGCACCCCAAAGAAAGGGGTGCTGA

Transcript

ENSQPTT00000058946

AGAGAgcatccaacatggcgtcgGAGACTGAGGGTGTAATGCTTCCTACATGAAAAGTCGGTCGAGAAATGTCTCGTCTTGCCGACTACTTTGCCGTTGTTGGCATCGACAAGGACTCAAGTTTAGgtgACGAGATAAAAGGAAAAGTGCTGCAAAGATTCCCAGCTCAAGACCGAAAAGATGTGCCTTTTCCAGAAGGGATTGAACTGTTCTGTCAGCCAAGTGGATGGAAAACATCCTATTTCATCAAGCCACACACCTTCTTTGTTTCCGTCCTCACAGACATGGATGGATTACACAGTTATTGCGCCTGTTTTACCTTCTACGAACCATATACtccaaaccaaaaatataCCAAAAGCTCTAAGAATGAAAGCATGTCGGATACCTCTTCTGTAAGAACAATACCAGACAGCAATCCTGGGATATCATTCAATAATGAAGATTTATCTCTAGATGCTTATGTTCCAAAATGTTTGTGCTTGGTGTCGAGGGTGACATACTTCGAAGTTCTCAAGAATTGCCTCACAACAGTCTATCTTTCCTTTCTATCGGGCAACAATACATTGCTAGAAAAACTTATTGGATCTATCCTAGGATTTGTCAAAGTACCTCCACCAGGAGGGCCTAAGTTGACATTTTCAATTGGTGCTGGTGACCGGCAGACTCTGTGCCCGCCTGTTTCAGAGACAATCCCAGTCACTGAAAAAAGTGTCGCTGTTCTGTTTCAGCAGATAGGGATTCATAACATGATGTCATTGTTCTGTGCCGCCGTCACAGAGAACAAAATTCTTTTCATGTCTAGCAGTTATGTTTTGCTTACCAATGCAACAAGAGCCATGCTAGCACTAATGTATCCACTAAAATTCAGCTATGTATATATTCCAATTCTTCCATCGGATCTGCTTGACTTTCTAAATGCACCGACTCCATTCATCATGGGAGTACACGAGCACTACAAGGACAATATTCCTGACCTGTCTGATGTGATACTGGTTGACATTGATGGTGGTCATGTACATATACCTGATAGTGTACATCTGGCGACATTACCTGAACCATTCCTCGGCAGAACAAGAAGAGAATTAAACCTAGTTATGAATCCTCAGCTGGTTAATGCTGATTACGTCTTTCAAACTCCTGTATCGCCGTCACCTTTACTGTTACAGGACAAGGAGATCAGAGCTATCTTCATTCGTTTACTTGCCAGAACATTAACTGGTTACAGGTCTTGTTTAACACTGATAAGAATCCATCCCAAGCCAGTTATTACCTTTAATAAGGTAAGATTCCTGGAGCAAAGAGTCATGATTGGAGACGAATTTCTTACAAGGGTCCTAGATAGCATTGCCTTCTCAACGCTTGTGGTCAACAGAGGACCACCTTACCGCTCTTGTGATCTGTTTGATGAGcTTTGTGCTGAGATAGAAGAAATCATTCAGAGTGAGAATGATGTCGACGCTGACATCCTGGCCAACATACAACACATCGCCAGAAAACTGTTTGAAAATGAACCAGCATGTGATAATTCAGAAAACCAAATCCAGAATACTCTTGATGGTATTGATACTGAGGTCTGTAAGAAGACCCTCTTTCCTCATCTTGATCAAGATATAATCAACCGGTTCATCAAAGAAGAAGCATCCCATGTGGAACATTTTCAAGTCATCAACAGTGAACCAAAAATCGTGCCGTGCAGTACTGGTTCATACAGCCGACAGCAGCATTATATTCATAGTAGGAAACTGGAAGTGCTGAAGGACTGTGTGACATATATCTTTGATAACAAGATATCAGAGGCTAGAATGGCTCTACCATCAGTGCTTCGATCTCTGAAATCCAAAGGTGCACAACTAGCTCTGTGTCATGAACTATCACTACGAGCCAAGCAGAATAGATCTGTACTTGAGCATGACCAGTTTGACTTGGTAGTTCGACTGATGAACAGTGCTCTACAgtcGGACGCTAGTATGGATAACACCGCAGTTGCCGCTGCATTACTCCCTCTCACCACTACTTTCTGCCGAAAACTTGCAACTGGGTGCATTCAGTTTGCTTACACCGGTGTCCAAGACCATGCTATCTGGGAGAAGCAACAGTTCTGGGAAGAAGCGTTCTACATGGACGTACAGACACAAATCAAACAGTTATATATCATAGACGAACCTCCCAAAGCTAACGAAGAAGACACTCtagaaaaaccagagaacagATCTTCAAGAAGCAGTCTTACTCCCTCAATGAAACACAGAAGTTTATCCACCAAGGATTCATCAGGGAGAGATTCCGGGGACTCGACGGAAGATTCTAAAGTTGCCCTGAAACCTGTGAATAGATCACCACCAAATAAACCGCAGCCCAGTGCTCTGGACATTGCTGCAGAACAGCTCAAGCGCTGGCCAAATATGGCCCAGAAAGAGAGGACCAATTTAATGTCTAGCGAAGAGAGTATTGTATATAGCCAAGCCATACACTATGCTAACCGTATGGTATATATGAGAATACCACTGAATGCATGTGAATTAATGCCATCAAGAACGCGTAATCAGGCCCCACACGCTGCAGGTGCCACAGGGTCTATAGCTGGTCGTGAGGGGTCAGTCAGTGGTGTGTATACTGCTGATGGTGCCGTCACTAATGGAGAAGTCGCAGGGGATTCAGCCAATAGTGTGACAGATAGTGGCTGGGATAGCTATCTTGATGACGAAGAGGAAACCATCGCAGACACTGTAACAAAATTTGTGTTACGATTCGTTGATCGGGTTGGGACAGAAGCTGGGATCAGGACAGAACACATGAAGTCACTTTATGCAATGATTCCAGGTGTCGTAGCCATGCATATCGAATCACTAGAGCCAGTGTGGGCACAGTACAGGCGTTTAGCACCCCAAAGAAAGGGGTGCTGAACGTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86WG5	Myotubularin-related protein 13 OS=Homo sapiens OX=9606 GN=SBF2 PE=1 SV=1
O95248	Myotubularin-related protein 5 OS=Homo sapiens OX=9606 GN=SBF1 PE=1 SV=4
E9PXF8	Myotubularin-related protein 13 OS=Mus musculus OX=10090 GN=Sbf2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002855 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12335 all species →	SBF2	Myotubularin protein	Family	Interproscan
PF02141 all species →	DENN	DENN (AEX-3) domain	Family	Interproscan
PF03456 all species →	uDENN	uDENN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005113 all species →	Domain	uDENN domain	Interproscan
IPR001194 all species →	Domain	cDENN domain	Interproscan
IPR051696 all species →	Family	DENN Domain-Containing GEFs	Interproscan
IPR022096 all species →	Domain	SBF1/SBF2 domain	Interproscan
IPR043153 all species →	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR037516 all species →	Domain	Tripartite DENN domain	Interproscan
IPR005112 all species →	Domain	dDENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12296 all species →	DENN DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032483 all species →	Biological Process	regulation of Rab protein signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20160	DENND1; DENN domain-containing protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.