Gene detail

Detailed information of ENSQPTP00000050202.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031548812.1, patatin-like phospholipase domain-containing protein 7 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000060104

ATGGACGTCGGTGAAgcaacgtcgaacttcaccaAAAGACTCGCCGAAATGCACCCATTAGAAGATATAtcgGTCAATTTTTTGGTTGGAATAGTGTTTTTAGTAATAGTGGTTTTGCTAATCTTCTTCATAAGGAAGCTACGACGAAAAGCTGCAGCCGTAATTCCTGCAGTTAAAGAAGTTTTAATCCCTGAAGCCAAGCCAAGGTTTCGTAAAAGAGACAAAATGATTTTCTACGGGAAAAAAATGTTACGAAAGGTAAGACAGTTGTCAGAAGAAAGAGATGAAGGATATAGaaggaaaataagaaaacgACAAAAAGTCATGTTCAACTTTGCAAAAGAGCTGTTGAGGTTTGATGAACATGAACCAGAAAGACAGATCAAGGAGCCTCCTCCTGCATTCCTGGAGGCTGACTCAGCTGAGGTTGACATTAACGAGCCACAGCTTCCTCCTGAAGTTATATACATGTTCAAGAGTGTCAGGTTTGTTCATTTGACCTataaaataggccatttcacggatcccaTTACTCAACCTCGGCCTGGTCAGcttggTGATGATTCTATTTACGTGGTACAAAATGGAAAAGTCTGTGTTTCCTTGATTGAAAAGGATGGAACAGAGATGCCAATGAAGGAGGTTGAGACAGGTGACAGTATCTACAGTGTTCTGGGTATCCTGGATGTACTCACTGGCCATACAACTGCCCTGCCTCAGATCCGTGCAAGAGCAATGGTGGATTCAACAGTACTAAAGCTTCCTGGTAAAGCTTTCCAGGAAGTATTTAAGAAGAATCCAGAATCACTGGTACGAGTGGTCCAGATAATCATGCTACGATTACAGCAAGTCACATTTATGGCTATGCATAACTTCTTAGGGCTGAGCTACGAGTTAATCGACCCGggTGTTCCAACTACTCGTCGCTCCACACTCACCACAGCAACGCTCCCAAACACTCTACCTCAATCAGTCAGCAGTCCCTCAAAAACCCGGTCATTCGAGGCACACCTTTCTGAAGTTCCTAAATCTTCACTGAAGAAGCCGCTCGTTCTGGATACAGCTCAAGATGTGAACGCGTCTAATAGTGGAAGCCCTAATCCTGACATCGCTGTAGCTAGCTCATCCAGTGCCTCAGAAAGTCCCAACCAATCAGCTGCTATTCCGGTAAAGAAGAAGCTCCAGCGCTCTGTCAGCTTTTCAGAGCCTACGTTTAAAGCCAAGGCAGCCCTAGGACGGTGCAGCTCCTTTACTTACATGTCCGGCCGGGCCAGTGCAGCTTCTGCTGGAGAGTTGACCGACTCTGAAGTTGCCTATCGTTCTTCGTCTGACTTCGACGCAGCTTGCGGTCGTGCGCGTGTCCCAAACGTTTATCCGCTGCCCGAAACTAGTAGTAGTGGAGGCGCAGGTGCTACGTTTGAAATTGAAAGCGATTCTGAGTCAAGCCCCACTTCAAAAGAATCGCGCTTCGATTTCCCCTGTGGTCATAGTAACGGACACAATGTGGAGGAATTTCCAAGCAAAACCCAAGACGAAAAAGATGATTTGCTGAAAACCGCTGTGCGAGAAATAGCAAAGAAACTAGATATACCGGTAAGACAGGTTTTGTTTGAGTGTAATCTACACTTTGTACTGTCTGGAACATTACAAGTTACACAAAGCAGTATGAATGATGAAACACAGAATGTATTGTATACCGCAGCACCTGGTGAGTTTGTGGGAGTCATGGCTGTTATTACTGGTGAACCTGCTTTATTTACCGTCAAATCAACTAGTGAGTGTTCACTGGCTGTCATAACGAAGGCGCACTTTTACAGTTTCATGCGGCAGAGACCGAGAGTAATCCTGAATGTGTCTTACTCGCTGGTTAAGCGCCTATCACCGTTCTTGAGGCAGATTGATTATGCTCTTGATTGGATGCACATTGAAGCTGGTAGAGCACTCTACAGGCAAGATGAGATGTCTAAGAGTATCTACATTGTACTTAACGGCCGTCTTCGATCGGTAGTTAAATtagaaaatggaaagaaagaattagTCAGTGAAGCTGGTCGAGGTGAAATCATTGGACTGGTCGAAGTCTTAACTCAAGCTCCTAGAGCGACTACCGTCCATGCCATCCGAGACACCGAGATCGCAGTGTTACCTGACGGGCTACTGAACACAATCAAGAGACAGCATCCGCATgttgTTTCTCGTCTGATTCATTTGTTGGGTGAGAGATTACTTGGTCAGTACAGACGTGGAACGGTACGAACAGAAGCTCTCTTAGAAAATCATCGGCCAGTAGACAATCAGATCTTTGGCGGGTCAAATCTTGGGACGGTTGCACTTATTCCTGCCTCTACAAATGTACCTCTGGCTAACTTTAGCTTTGAATTAAGTCTGGCTTTGAATGCGATAGGTACTACTTTGTTGTTAACCAGTAACTTCGTACGGAGTAACCTGGGTAGTTCTGCACTCGACAGTATGAATGAATACCGTCTTGCAAGCTGGTTGGGACAACAAGAGGATCTTCATCGTATGGTGTTGTATCAGGCTGATTCTTACATGTCAGCTTGGACTAAAAGATGCATAAGACAGGCTGACTGTATACTGATTGTTGGATTAGCAGATGAAAACCCAGCAGTCGGACAGcttGAACTTCAGCTAGAAAGCATTCAAGTGCGAGCCCAAAAGGAGCTGATCCTTCTTCATAGTGAGGTTGATAGCAATCACCGGATATCGGGTACAGTACAGTGGTTAAATGCCCGGGGGTGGATATCAGCGCATACACACGTTCGATGCCAGAAGAAAATATTCAGTAAGCGTTTCCTATCTGATCGGtATGCAAGAAATCCCGCAGCTTATCAAACCCCGGCAAGGAACTCCGACTTCTCTCGCCTCGCTCGTCGTCTTACTGGGACATCAATCGGCCTTGTTTTGGGAGGAGGTGGAGCAAGGGGCCTGTCACATGTAGGTGTAATCAAGGCTTTAGAGGAAGCAGGCATTCCCGTGGACATGGTAGCAGGCACTAGCATGGGGTCCTTCGTAGGAGCAGCGTTAGCTGAATATGGTGATGTGGCCAAAATGTGTCAAAAAGTGCGAGAGTGGTCATGGGATATGACGTCTGTATTCACTCAAATACTCGACCTCACCTACCCATTTACATCAATATTTTCAGGTAACGGATTCAATGCAAGCATCAGGAGTTCATTCGGAGAAAGACAAATCGAGGACTTATTGTTACCATACTTCTGTATAACTACCGATATCACCTCATCTAGAATGAGAGTACACACCGATGGTTCACTGTGGCGGTATGTTCGTGCTAGTATGTCTCTCTCCGGGTACCTGCCTCCTCTGTGTGACCCTAAAGATGGCCATCTGCTGCTGGACGGTGGATATGTCAATAATTTACCAGCTGATGTGATGAAGAAGATGGGAGCACAGACGATTATTGCTATTGATGTGGGATCGGAAGACCATGGTGAACTCATGAATTACGGGGATCATTTATCGGGATGGTGGCTGCTATGGAACCGATGGAATCCCTTCTCAGAAACTGTCAGGATCCCTGACATGGCTGAGATTCAATCCCGTCTCGCGTACGTCTCGTGTGTTCAGCAGCTGGAGGAGGTAAAGATAAGCAGCTACTGTGAGTACGTACGACCCCCTATCGACAGGTTTAAGACATTAGAATTCGGAAGATTTGACGAGATAGTGGAGGTAGGCTTCCAGCACGGCAAGACTGTGTTCGGTGAATGGAGCAATTCTAATCGCTTACCAGAAATTCTACGCGAGCAAATCAGCAGATCACACATCTATGGTAATCAGAATCCTGACAAGGGATCCCATTCCCATAAAAGTGGCCAGACGTTCACTGATCTAGCCGAAAAAATATCTCGTATTGACCCCCCTCTAAGAAGTCTATCCTACGAGGACTGGATTCCTCATGATGACTCAGATGTAGAGCTCAGCTCCAGCGCTCCCGAAGCTAGACATATGTTCCGAAGCATTTCCGAAGACGAATACGACGACGATGACATGACGATACGATATCGTCCGCGCACCGGCTCATTGTCAGAGCACGAAGATCTGTTAGCCCTTCAAGCGCAAGCCGAGGCTGTGGCAAAATTTCAGACAATAAAGGATCTCGGGTCTATGAGCGCAGATGAAGCTGGATACGAGTCTGATAACATTCATCTTCGACGCCGCTTACTTGGCAGGGTAATGAGCGATCCTTCAGCCTAG

Transcript

ENSQPTT00000060104

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RDS0	Patatin-like phospholipase domain-containing protein 6 OS=Pongo abelii OX=9601 GN=PNPLA6 PE=2 SV=1
A2AJ88	Patatin-like phospholipase domain-containing protein 7 OS=Mus musculus OX=10090 GN=Pnpla7 PE=1 SV=1
Q8IY17	Patatin-like phospholipase domain-containing protein 6 OS=Homo sapiens OX=9606 GN=PNPLA6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002092 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01734 all species →	Patatin	Patatin-like phospholipase	Family	Interproscan
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR001423 all species →	Conserved_site	Lysophospholipase patatin, conserved site	Interproscan
IPR002641 all species →	Domain	Patatin-like phospholipase domain	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR050301 all species →	Family	Neuropathy target esterase	Interproscan
IPR016035 all species →	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14226 all species →	NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004622 all species →	Molecular Function	lysophospholipase activity	Interproscan
GO:0046470 all species →	Biological Process	phosphatidylcholine metabolic process	Interproscan
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14676	NTE, NRE; lysophospholipid hydrolase	EC:3.1.1.5	Glycerophospholipid metabolism	ko00564	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.