Gene detail

Detailed information of ENSQPTP00000050586.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031555320.1, UBX domain-containing protein 6-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000060491

CAGTAAAATACGAAGGAAAAGGTATATACGACCACATTTTGAATCCATGAAGCTATGAAGAAATTCTTCGAGAAAGCTAAGCTTGAGATCAAGTTCAGGAAAGCTGGTGATGGACACACCTTGACTGAGAGCAATACTGGTCACCGTCCCTCAACTTCACATTCAAGTACACCAGCCCCAAGGGCTGTTCCCTGTACAAGTGCACAGAGGGCAGGAGAGGCAGCTCTTTTAAGAATATCCCAGCAAGAAAAAGCAGCAAGCAAAAAGCCGCAGTCAGTGACAGCCACTTGGAAGCATAACAGTGCTTCTACGAATACAAATAGCAGTGGAAGCCCTTCCCTAGACTTTGAGAAACTTAGAAATGAAGTGAAACAAGAAGTttttgcaaataagaaacaatTTTCAGCACCATCTCAATCTGCATCTACTCTATCACAGcCTTTAGTTGCCGTAAAAGATGAGCCTATGAGACTATCAGTAGAAGGGATTTACTTTAAATGCCCACTTTGTCCAGTGACTGTCCTTCAAAAAGAACAAGATTGCCATCTCAAAGAATGTCTGGAAAATATGTATACAGAAAACCCCCACATGGCAGCGGCATCCATGATTCAATCCCTGAACAAGgataaagaaaaagttcaagcTTGTATTGACATTCTATGCAAATACATTGACAATATCTGTAACAATCCTGGTGAAGAGAAGTACAGGAAAATCAAACAGAGTAACAGAATATTCAAGGAGCGTGTTTCTACAATTACTGGTGCTATAGAATTCATACTGGCATGTGGGTTTGAAGATATGATGATCAAGCAAGAAGATAAATTGGAGAGTTTTTTCGTGCTTCCAAGTGAAAAGGCTGAGGATCAAGAAACTCTACAAACGTACAAAGCAGTTCTCCTCTCGACTGAACCACTTAAGCCTACACTGGACAGAAATCTTAAAGTATTTCGACCATCTTCGGGTACAATGCAATTCGAACTCCCTGAAgaattcttttctctttcgtCTGAGGAAATCAAGAGAGAATATAATTCCAAATTAGAAGAGATTGACAAGAAATGCCAACTGAGAACAAAAGCCATGAGAGAAGCAGACAAGAAACCAAGCAAAACGTACCGATTTACTTTAATTCGAATAAGGTTTCCTGACGGAGTTATACTACAAGGTACTTTCTACAGCCGAGAAAAGCTTGGGGACTTGTTCGGATTTATTCGCCAATCACTCGAGTCTGATTGGCAGCCGTTTGTACTGAGTGACCCAACTGGGCAGCTCAAAGAAGAGGAAGCTACTCTTAATGATTTGGGCTTGGTTCCTGCAGCAGTTGTTAACTTCGCCTGGGACGCAACCATCATGGCTGACATCGTGGCTGCTAGCGGCTCTGTGCAGCAAGGCAACTACTTGAAGCCAGAAGTAATGGCTTTAATTCAAGAGCTTAGTTAGACGTTATCAAGAAAGCTGTCATTATGGTATCGGTTAATGGTCCTCTCGTTCCAGTTTTCTTGATGCCGGAGGCAACCGAGATGCACTGGAGCAAGAGAGATCAAGATCACAAGGTCGTGCTTAGTGTGTGATAGTATCCCATCAGTAAAGGTTATTTTTGACTGCGAGACAGTTGTGTGATCTGCCACGGAGAGGTTTTGTGAGTGCATGGGGACATGTTTTACATACATCGAGGGAGTAACAAGGTACTACACGttgttaataataatcttaTCATATTCGCCACCCTCACATCAAAGACCTCTTCTTCTGAGATAGCGAACAGGGTGCATTGTGTTCTAGCTTCGGTACAAACATCTGttgttcatcatgccttatatggtgttgtttgtaccatagctagaccacaatgcatcctgtttatcgAACTCGGAAATGGCCTATAgaatcatgatcatgatcatcatggTTAGTTggtttgtcatcatcatcattatcactatcatcatccaCCATTGTGATTGTCATCGTCGTCttgaccatcatcattatcttctttaccatcatcatcatcactattatcgccatcgtcatcatcatcatcttcttcttcatccatcatcatcatcactattatcatcatcatcgtcatcatcatcatcttcattcatcatcatcatcttcatccatcatcatcataactaTTATCACCATcttcttcaccatcatcatcatcatcatcaccatcatcgtcatcatcatcaccatcatcacattaccatcatcatcatcttcaccattgTCTTTTCAAAGTTATTGTGGCTTAAAGTATAATTATTAAAAtctacaaagaaatggggcTCATCAGGCTTGCTCTTAAAACTATAAATTAAATTTCCAATTATAAATACCAgataagaaataaagaaagatatTCAAAATACTCAAAAGCTCGgcaaataataaatacatgTACTGTAAATGAAACAACAACCGAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99PL6	UBX domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ubxn6 PE=1 SV=1
Q9BZV1	UBX domain-containing protein 6 OS=Homo sapiens OX=9606 GN=UBXN6 PE=1 SV=1
Q2KIJ6	UBX domain-containing protein 6 OS=Bos taurus OX=9913 GN=UBXN6 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006234 (this species only)
Ubiquitin family	ULD\|UFD\|UBX · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09409 all species →	PUB	PUB domain	Domain	Interproscan
PF00789 all species →	UBX	UBX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042774 all species →	Domain	UBXN6, PUB domain	Interproscan
IPR001012 all species →	Domain	UBX domain	Interproscan
IPR018997 all species →	Domain	PUB domain	Interproscan
IPR036339 all species →	Homologous_superfamily	PUB-like domain superfamily	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23153 all species →	UBX-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14011	UBXN6, UBXD1; UBX domain-containing protein 6	-	Protein processing in endoplasmic reticulum	ko04141	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.