Gene detail

Detailed information of ENSQPTP00000051187.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031573578.1, leucine-rich repeat-containing protein 56-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K375	Leucine-rich repeat-containing protein 56 OS=Mus musculus OX=10090 GN=Lrrc56 PE=2 SV=1
Q8IYG6	Leucine-rich repeat-containing protein 56 OS=Homo sapiens OX=9606 GN=LRRC56 PE=1 SV=1
Q4V8C9	Leucine-rich repeat-containing protein 56 OS=Rattus norvegicus OX=10116 GN=Lrrc56 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004228 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03034 all species →	PSS	Phosphatidyl serine synthase	Family	Interproscan
PF12799 all species →	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR040091 all species →	Family	Leucine-rich repeat-containing protein 56	Interproscan
IPR004277 all species →	Family	Phosphatidyl serine synthase	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR025875 all species →	Repeat	Leucine rich repeat 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22708 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006659 all species →	Biological Process	phosphatidylserine biosynthetic process	Interproscan
GO:0106245 all species →	Molecular Function	L-serine-phosphatidylethanolamine phosphatidyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000051187.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.