Gene detail

Detailed information of ENSQPTP00000052188.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031568249.1, uncharacterized protein LOC116302935 isoform X5 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000062174

ATGAAAAAGCCCAACACCTTGCCTCCACCAATGCCCAAACCGAGACCACCTCCAAAACCTGAGATCCCTTTAAAGTCTGTAGCCAAAATATGTCCAGCAACAGGCAAACCAATAGTACCACCAAAGCCACATCGCAGAACCCCACCATCAATTGCAAGTTACATCGAGTattttaaTGAATTATGTATTGAACCTCAGCTTCCTATTAGAAGAAAGGCACCTCCAAGCTCTTCCTTGATTGTTAGACCAACACCCTCACCAAGGTTATCACCCCATGCTTCACCTACCATATCACCGATATCTGGAGATGATTATCGTGATACAGTTCAACCAACTCCAAGACCAAGAGCAAAAGTAATAGAAACAAAAGGTGTTTCAAATAACACAAACGAAGCAATAAAGAAACGTATTGCATCACGGAGACAACTCAACCCTCAAAATGCTAACAGGACATTTCCTGTAGATGTCAAAAACAGACGACCTCCACCCCGTCCCCCCTCAAATAGTAATGGTAGTCCCAAGAAAAAAGAACCAACAGTCTCCAGAGATCTTGACAGAAGGGATGGCAAAGGCCCAACAGTCTCCAGAGATCTTGGAAAAGGTTCAGAAACTACCCTAAAAACTGCAGAAGATCAATCTCTATACTGCTATGCATATGAGCATCCTTTTCTCACAGTCACCATGCACAGCAACTGCCCAAACCCTCAAGGCAACCAATCAGAAGACAATTCATATATTGAACCTGATGCAACTGCTGTGAAAAGTTTTATGGAGcaagtaaaagagaaagaatgtgTAAGTAGTGGTCAATATGAGATACCTGCAGAAGGCGGACAAGAAGATATATTAGACCAAGTGGAACATGAATCAAAATCTGTCACTTCAACTAAATACACAATTCCTGAACAAATTGTAAGTGATGATCAAGATGATAATATTGAAGTTGAATCATCAGACTCAGAAGACTATCATGAATATGAGTATCCTAAGGACACTCCTCCTCCACTACCTCCACATAGAATAATCCATAGTGGCTGGTATGACGTAACCCCCTTCACAGATGAGGTGAttaaggatgatgatgatgaagatgatgatgatggtaaagaCACTCCTCCTCCACTACCTCCACATAGAATAATCCACCGTGGCAGCTATGATGTAACCCCCTTCACAGATGAGGTGAttaaggatgatgatgatgaagatgatgatgatgattatgatggtgaaTATGTTGAACCACCTGATACCCAAGGTTCTAGAGAAGAAGATTCAGATGAAGAAACATCTTGGGgggatgatgatgaaagtgtTGAAGAGCCACTTTATCAAATATATGTTGCCAGAACGCTGAAAAAAGATCGAACATTGAGTCGTAAACGAACAATGAGTAATCAACAAACAGAAACGTTTATTGATGATTTAAACAAAAGAACCTTAAGGAATATGAGGATGTTATGGTGTGAGATACCAGAGGTTGTTTCTAGTGGGATCCTGGATAATATTGATCCTGAAGAACGCAAGAGACAAGAGGTAATGTTTGAGGTGATTACATCAGAGGCATCTTACCTGAAAAGCATTAACATTTTGAAATCCTACTTCATGAAATCCCCTGAACTGACTCCTGGGACGCCACAGGGTGTTATAGAGAAAGCACAGCATCATATCTTATTTTCTAATGCGAGAGGTGTTGTGGAGACTAGTGAAATGTTTCTTGAGGCTTTACGAAAAAGACAGAAAGAATCATTGGTCATTTCATCCATCAGTGATATCATTGAAGAATTCgCAACCAAGTACTTTGAAGTGTATGTCAAATATTGTTCCAACCAACTTTATCAGAAAAGAATGATGGAGGAACTCAGGAAAAATCCTAGATATGTTGAAGCAATCCAACGGCTAGAAAAGTGCCCTACTGCCCAGTGTTTAAGTATGgactcttttcttcttcttcctatGCAAAGAATAACGAGATTACCACTTCTTGTTGATGCTATCTGTCTCTGTTGTCAGCCTGGGAGTGATGAATTTATCAAGACTGATGCGGCACTGAAAGCTGTTAGTAAGGTTGTTCAAAACTGCAATGAAGGAGCTCGTATAATGGAGCGTATGGAAGAATTGATTAACCTTCAACGTCAAATTGAGTTCACCATGAAGaCAATAGCATTAGTGACAACTAAGAGATGGCTTCTCCGCAGAGGAGAGGTGCAGGTTCTTGTGATTGAACAACCAAAAAGGCCCTTTTGTAAGAAGAAACTAAAATTAAAGCCTGTGTACATGTTTCTTTTTAACGATTTATTACTGATCACCAAGAAAAAAGGTGAACGTCGGTATCGAGTTTTAGACTATGCAGCTCGTCATATGACTAAAGTGGAAGAATTATCTACCGATCCTGCAATACAACTGTACTACATGCTCTCTTTAAGATTACTTGAAAATTCCAATGCAAAAACCAAAGACTTCATTGTATGTGCTGAGAGCCAaACAGACAAAACTAAATGGCTGGAAGCATTCAACCCCCCTAAGGGAGAACAAGAGGGAGAAAAGGTGTACGGAGCGTGTGaTTGCTCTCAAGTACAAGTCATACATGACTACAGTCCACAGCAACCTGATGAATTGGCCTTACATGAAGGAGATGTTATAAACGTACAAGGAAAACTACCAGATGGTTGGTATTATGGTGAAAGGTTGTGCGATGGAGTCTGTGGATGGTTTCCTGCCAACTACACTGAGAACATTCGTAATGAACATCTTGATACGTAG

Transcript

ENSQPTT00000062174

AAAGATGTCATAAACAAAGATGAATAACCTCCTATATGTATAATGGAATCCATTATGCTTAAAGCATGAAAAAGCCCAACACCTTGCCTCCACCAATGCCCAAACCGAGACCACCTCCAAAACCTGAGATCCCTTTAAAGTCTGTAGCCAAAATATGTCCAGCAACAGGCAAACCAATAGTACCACCAAAGCCACATCGCAGAACCCCACCATCAATTGCAAGTTACATCGAGTattttaaTGAATTATGTATTGAACCTCAGCTTCCTATTAGAAGAAAGGCACCTCCAAGCTCTTCCTTGATTGTTAGACCAACACCCTCACCAAGGTTATCACCCCATGCTTCACCTACCATATCACCGATATCTGGAGATGATTATCGTGATACAGTTCAACCAACTCCAAGACCAAGAGCAAAAGTAATAGAAACAAAAGGTGTTTCAAATAACACAAACGAAGCAATAAAGAAACGTATTGCATCACGGAGACAACTCAACCCTCAAAATGCTAACAGGACATTTCCTGTAGATGTCAAAAACAGACGACCTCCACCCCGTCCCCCCTCAAATAGTAATGGTAGTCCCAAGAAAAAAGAACCAACAGTCTCCAGAGATCTTGACAGAAGGGATGGCAAAGGCCCAACAGTCTCCAGAGATCTTGGAAAAGGTTCAGAAACTACCCTAAAAACTGCAGAAGATCAATCTCTATACTGCTATGCATATGAGCATCCTTTTCTCACAGTCACCATGCACAGCAACTGCCCAAACCCTCAAGGCAACCAATCAGAAGACAATTCATATATTGAACCTGATGCAACTGCTGTGAAAAGTTTTATGGAGcaagtaaaagagaaagaatgtgTAAGTAGTGGTCAATATGAGATACCTGCAGAAGGCGGACAAGAAGATATATTAGACCAAGTGGAACATGAATCAAAATCTGTCACTTCAACTAAATACACAATTCCTGAACAAATTGTAAGTGATGATCAAGATGATAATATTGAAGTTGAATCATCAGACTCAGAAGACTATCATGAATATGAGTATCCTAAGGACACTCCTCCTCCACTACCTCCACATAGAATAATCCATAGTGGCTGGTATGACGTAACCCCCTTCACAGATGAGGTGAttaaggatgatgatgatgaagatgatgatgatggtaaagaCACTCCTCCTCCACTACCTCCACATAGAATAATCCACCGTGGCAGCTATGATGTAACCCCCTTCACAGATGAGGTGAttaaggatgatgatgatgaagatgatgatgatgattatgatggtgaaTATGTTGAACCACCTGATACCCAAGGTTCTAGAGAAGAAGATTCAGATGAAGAAACATCTTGGGgggatgatgatgaaagtgtTGAAGAGCCACTTTATCAAATATATGTTGCCAGAACGCTGAAAAAAGATCGAACATTGAGTCGTAAACGAACAATGAGTAATCAACAAACAGAAACGTTTATTGATGATTTAAACAAAAGAACCTTAAGGAATATGAGGATGTTATGGTGTGAGATACCAGAGGTTGTTTCTAGTGGGATCCTGGATAATATTGATCCTGAAGAACGCAAGAGACAAGAGGTAATGTTTGAGGTGATTACATCAGAGGCATCTTACCTGAAAAGCATTAACATTTTGAAATCCTACTTCATGAAATCCCCTGAACTGACTCCTGGGACGCCACAGGGTGTTATAGAGAAAGCACAGCATCATATCTTATTTTCTAATGCGAGAGGTGTTGTGGAGACTAGTGAAATGTTTCTTGAGGCTTTACGAAAAAGACAGAAAGAATCATTGGTCATTTCATCCATCAGTGATATCATTGAAGAATTCgCAACCAAGTACTTTGAAGTGTATGTCAAATATTGTTCCAACCAACTTTATCAGAAAAGAATGATGGAGGAACTCAGGAAAAATCCTAGATATGTTGAAGCAATCCAACGGCTAGAAAAGTGCCCTACTGCCCAGTGTTTAAGTATGgactcttttcttcttcttcctatGCAAAGAATAACGAGATTACCACTTCTTGTTGATGCTATCTGTCTCTGTTGTCAGCCTGGGAGTGATGAATTTATCAAGACTGATGCGGCACTGAAAGCTGTTAGTAAGGTTGTTCAAAACTGCAATGAAGGAGCTCGTATAATGGAGCGTATGGAAGAATTGATTAACCTTCAACGTCAAATTGAGTTCACCATGAAGaCAATAGCATTAGTGACAACTAAGAGATGGCTTCTCCGCAGAGGAGAGGTGCAGGTTCTTGTGATTGAACAACCAAAAAGGCCCTTTTGTAAGAAGAAACTAAAATTAAAGCCTGTGTACATGTTTCTTTTTAACGATTTATTACTGATCACCAAGAAAAAAGGTGAACGTCGGTATCGAGTTTTAGACTATGCAGCTCGTCATATGACTAAAGTGGAAGAATTATCTACCGATCCTGCAATACAACTGTACTACATGCTCTCTTTAAGATTACTTGAAAATTCCAATGCAAAAACCAAAGACTTCATTGTATGTGCTGAGAGCCAaACAGACAAAACTAAATGGCTGGAAGCATTCAACCCCCCTAAGGGAGAACAAGAGGGAGAAAAGGTGTACGGAGCGTGTGaTTGCTCTCAAGTACAAGTCATACATGACTACAGTCCACAGCAACCTGATGAATTGGCCTTACATGAAGGAGATGTTATAAACGTACAAGGAAAACTACCAGATGGTTGGTATTATGGTGAAAGGTTGTGCGATGGAGTCTGTGGATGGTTTCCTGCCAACTACACTGAGAACATTCGTAATGAACATCTTGATACGTAGTAGATGAAATAGAAATTGCCCTCATGTGAAGCCTACTCCAGAATACTTTTACCAAGTCAAGTGGCAACACTAGTCTACCATACACTGAAAAGGCAGCGATCTTGATGGTTACAAAAACGATATGTGCATATTCTTTTATCCCAATGTGACTGTTATTGACTTACATTTTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5BKC9	Ephexin-1 OS=Rattus norvegicus OX=10116 GN=Ngef PE=1 SV=2
Q5VV41	Rho guanine nucleotide exchange factor 16 OS=Homo sapiens OX=9606 GN=ARHGEF16 PE=1 SV=1
Q8CHT1	Ephexin-1 OS=Mus musculus OX=10090 GN=Ngef PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002452 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16453 all species →	IQ_SEC7_PH	PH domain	Domain	Interproscan
PF07653 all species →	SH3_2	Variant SH3 domain	Domain	Interproscan
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR047270 all species →	Domain	Ephexin-like, PH domain	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR033742 all species →	Domain	IQ motif and SEC7 domain-containing protein, PH domain	Interproscan
IPR047271 all species →	Family	Ephexin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12845 all species →	GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0090630 all species →	Biological Process	activation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000052188.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.