Genomic Location: chr16:5591491...5613557
NR annotation: XP_031564040.1, myosin heavy chain, striated muscle-like isoform X1 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families
| CDS |
| ENSQPTT00000063146 |
| Transcript |
| ENSQPTT00000063146 |
| Protein |
| ENSQPTP00000053052.1 |
| UniProt accession | Description |
|---|---|
| P24733 | Myosin heavy chain, striated muscle OS=Argopecten irradians OX=31199 PE=1 SV=1 |
| F1PT61 | Myosin-16 OS=Canis lupus familiaris OX=9615 GN=MYH16 PE=3 SV=2 |
| Q9BE39 | Myosin-7 OS=Bos taurus OX=9913 GN=MYH7 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001260 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00063 all species → | Myosin_head | Myosin head (motor domain) | Domain | Interproscan |
| PF02736 all species → | Myosin_N | Myosin N-terminal SH3-like domain | Domain | Interproscan |
| PF01576 all species → | Myosin_tail_1 | Myosin tail | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001609 all species → | Domain | Myosin head, motor domain | Interproscan |
| IPR008989 all species → | Homologous_superfamily | Myosin S1 fragment, N-terminal | Interproscan |
| IPR004009 all species → | Domain | Myosin, N-terminal, SH3-like | Interproscan |
| IPR014751 all species → | Homologous_superfamily | DNA repair protein XRCC4-like, C-terminal | Interproscan |
| IPR000048 all species → | Binding_site | IQ motif, EF-hand binding site | Interproscan |
| IPR036961 all species → | Homologous_superfamily | Kinesin motor domain superfamily | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR002928 all species → | Domain | Myosin tail | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45615 all species → | MYOSIN HEAVY CHAIN, NON-MUSCLE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003774 all species → | Molecular Function | cytoskeletal motor activity | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0016459 all species → | Cellular Component | myosin complex | Interproscan |
| GO:0051015 all species → | Molecular Function | actin filament binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000146 all species → | Molecular Function | microfilament motor activity | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016460 all species → | Cellular Component | myosin II complex | Interproscan |
| GO:0032982 all species → | Cellular Component | myosin filament | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K17751 | MYH6_7; myosin heavy chain 6/7 | - | Cytoskeleton proteins | ko04812 | deepkoala |
Genes whose expression across the transcriptome samples of Actinia mediterranea tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Actinia mediterranea, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
