Gene detail

Detailed information of ENSQPTP00000053144.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031551284.1, double-stranded RNA-specific editase Adar-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000063259

ATGGgtcaagttggcattgcagtgcattgtggtacTGCTTTAAggaacatatttccaagatggctgtATTTTGACCCCtcaaacagtcccacaatgcactgcagtgTTTACTCGACCCACTTTTTCCCCATCTCGAAATGGCCAATattctttgttaaagaaggtatttcttttaaaacagATGACAGCATGTCAATGGACCAGTCAGGATTCGATGCAGACGTAGATGAAGACATGATAGATCCTAATGGTAGCTTAATGGACCAGGTCATGGATGTCCTTCATTCTGGTGGTTCATTCACAATCAGAGGAATCTTGAACAGCATTTTAATGTGCTCATCTAACATTCACGTCCAAGACTGCCTCACATCGCTAGCCTCACAAGGACTAGTAGAAGTAGTTGGGACTAATCCTATTAGATGGCAACTGGTAGGAGGACCTTCAAAACAGCCGACTCCACCCAAGGAAAGTAATCTTTGTCACTCCCCAAACCCATCAATGCAATATAGGGTTACATCTGCAAATAATCCCTTTGATGGTGATCTTAACTCAAAGCAAGGTCCACCTAGAGGAGTATCAAACCTGGaccaatttgaaaataattcatttgttAGTGCCAGACAATACAGTTCTGATGTCTTTACTTCTCAGCTAGGAAgaagccattttgaaaacaactCAGTCTCTCCACACGATAAAACTGGTTTCCAAAAACAAGCCAACGTAGGATGTCCTCCACCTCCTTCGGCCGAGCTGTTTAAGTCTTTGATGTCACAGTGCAAGTTCCCTTCAGCACCAGTCAAGCAGGCAGGCAGTAACACGAGAAACTCGGAGCCACATTCGTTCAGTAATTTTCCACAAAGAGGAACAAGCCCTCCATCTGTTATGAATGTTTCTACTCCTCCTGGAAGTAAATATCCTGATAATAATTTTTCTCCAAGAATTGCCCATCCACCCTCTGGCAGCTCTTCTTTTGGCCAAGACAATTCTCTTCCAGGACAAGCCAAAAATAATCGTTCTATTGTAAAAGGAAACAATGCTCCTTCTATTGCTTGTAACTTCAACCCATCTTATGGTCAAGATAGTTTCTTTTCTCAACCACATGGAAAAAGTTTTGGTACCTTGAATCAAGAGGAAATAAGATCTCAAAAAACAGCTCTTAGAGAAGATGCAGGGAAccattttgaagaaaatagGCAGCAGAGCTCAAGCTTTCCTCGACCGCCTTCTGCACAAATGTTCGAGACGTTGGTAAAGAAGGGTCCACAGTCATCAAAGCCAGTGTCTTCCAAgaatcaaatcaaaaaactgaCAGAGTTGGAGTCGAAGGTGTTAGACTTTATGAAACAGACAGGAAAGCAGTGTGATACCTTACAGATATCACGTGGTGTTGGATTGAGAACCAAAAAGGACGTCAATCCATCTTTGTATCGTATGCAGACTATGGGGTTGATTGTAAAGGTGCACGACAAACCACCAACCTGGAAGACAAGACCCGAGAACTTAAGTCTGGTGACGAGTGAAGTTCATGGGAGCACCACGACTGGTAAGCGGTTTTCTACCAAAAACGCAAACCCCCTTGGTTCTGGAATAACAAACTATCCTCATACCTTCACTGATGATAGAATGCAGAGCACATCTCAGCCAATCAATCCTCTTGGCAAGAGAACTTTATCATTAGAAGATCGTCAACCACAAAAGGTAGTTCACTACGAAGGCACGCCTGACACTCACAAGTCATTATCGCCATCTTCTCAGCCAGAAGTGCAGACCCAAGCGCTGTCAAAAGTAGTGCATTCAGCGATCAATCAAAACCCAGTAAGTGCGTTGAATGAATATGCACAGAAAAATCGCTTGGATTTGACATTTGAGGTCATCAATgaagggagaaatttcaataagCCGCCTTTTACAATTGCTGTAGTTTTGGGTGGCCAAATGTACCCTGCTGCTACCTCATCAAATATGAAAGACGCGAGAAGAGAAGCATGTGATATGGCTCTTAGAGCTCTTCTTGGCCACAACCTAGACCCAGGAAGCCCAACCAACCAGTTAAACCTGTCTCAGCCTAATTTATCAAGTCTAAACTGCGCAAGGACCCACTTTGATATGATTGCAGCACTTTCACAGCATGCATTTGTCCAGCTTGCTGCCACTATTCCTGACAAATTTGCCGGGAGAAAGGTAATCGCATGTATTGTGATGAAAAAAGGAGCTCAAGATCCTGGTATCGTTGTAAGCCTTGGCGCAGGAAACCGCTGTGTTACTGGCCAGCGGTTGAGCATGGAAGGCAAAGTTGTGAATGACTCCCACGCAGAGATCGTTGCTAGGAGATCTTTGCACCGGTTCTTTTATTCTCAGCTCAACAGCTTCTACGATGGCCATGAGTCTATCTTCGAGAAGATGAACAATGCGACCCTTCTGAAACTCAAGGAAGGCATTTCATTCCATTTGTATATCAGCACGGCCCCCTGTGGCGACGGAGCACTGTTTACTCCAAGGCTCGACGATGTACTAAAAGAACCAGAAGCTCAAGGTCACCAACATTCCCCAGAATTCTCAGCCAAATCTCAAGGAATTCTAAGGACAAAGATAGAGGACGGTGAAGGCACTATTCCGATTGATACAAACGAAGGTCCTCAAACTTGGGATGGTCTTCTTCGTGGGGAGAGATTGCGTACCATGTCCTGCAGTGATAAGATCTGTCGGTGGAACGTTGTGGGACTTCAAGGCGCTCTTTTAAGCCATTTCATAGAGCCCATTTATTTAGAGTCCCTAACCTTGGGGTACCTGTATGATCATGGGCATCTATCGAGAGCTGTGTGCTGTAGATTGCAACACAAGGTTGATCTTGTTGGCGAACTGCCAAAGCCATTCAAAATCAACCACCCCTTACTCGGCCGTGTCACTGCATATGAAGCAACAAGACACACCGAAAAGACGAACAATATGAGCGTAAATTGGACCACCAATGACACAGCAGCGGAAGTGACGGATGGACGAACGGGGGCGTGTTTGTCGAGAACCAATAACAGTCCTACGCCATCGCGTATCTGTAAGGCATCGTTATACAACTTGTTCAAAGAAATCTGCGCCAAAGCACAGAGAAATGATCTGCTTCACTCAGAGACTTACAGAGAGGCAAAGGAAAGAGCAACAGGTTTTCAGAGCGCAAAGCGTTTGATGTTCGAGTGTTTTAGGAAGTCGAAGTATGGGTCTTGGGTTAGCAAGCCACCAGAGCAAGAAATGTTCTGA

Transcript

ENSQPTT00000063259

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P55265	Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens OX=9606 GN=ADAR PE=1 SV=4
Q99MU3	Double-stranded RNA-specific adenosine deaminase OS=Mus musculus OX=10090 GN=Adar PE=1 SV=2
P55266	Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Adar PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001415 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02137 all species →	A_deamin	Adenosine-deaminase (editase) domain	Family	Interproscan
PF02295 all species →	z-alpha	Adenosine deaminase z-alpha domain	Domain	Interproscan
PF00035 all species →	dsrm	Double-stranded RNA binding motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014720 all species →	Domain	Double-stranded RNA-binding domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR002466 all species →	Domain	Adenosine deaminase/editase	Interproscan
IPR042371 all species →	Domain	Z-binding domain	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10910 all species →	EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan
GO:0003726 all species →	Molecular Function	double-stranded RNA adenosine deaminase activity	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006382 all species →	Biological Process	adenosine to inosine editing	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan
GO:0008251 all species →	Molecular Function	tRNA-specific adenosine deaminase activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004000 all species →	Molecular Function	adenosine deaminase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000053144.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.