Gene detail

Detailed information of ENSQPTP00000053247.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031575103.1, endonuclease III-like protein 1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35980	Endonuclease III-like protein 1 OS=Mus musculus OX=10090 GN=Nthl1 PE=2 SV=2
A7M7B9	Endonuclease III-like protein 1 OS=Gallus gallus OX=9031 GN=NTHL1 PE=2 SV=1
P78549	Endonuclease III-like protein 1 OS=Homo sapiens OX=9606 GN=NTHL1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007382 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00633 all species →	HHH	Helix-hairpin-helix motif	Motif	Interproscan
PF00730 all species →	HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011257 all species →	Homologous_superfamily	DNA glycosylase	Interproscan
IPR000445 all species →	Conserved_site	Helix-hairpin-helix motif	Interproscan
IPR003265 all species →	Domain	HhH-GPD domain	Interproscan
IPR023170 all species →	Homologous_superfamily	Helix-hairpin-helix, base-excision DNA repair, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43286 all species →	ENDONUCLEASE III-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000703 all species →	Molecular Function	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	Interproscan
GO:0003906 all species →	Molecular Function	DNA-(apurinic or apyrimidinic site) endonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006285 all species →	Biological Process	base-excision repair, AP site formation	Interproscan
GO:0006296 all species →	Biological Process	obsolete nucleotide-excision repair, DNA incision, 5'-to lesion	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000053247.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.