Gene detail

Detailed information of ENSQPTP00000053448.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031553127.1, anaphase-promoting complex subunit 4-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000063605

ATGACCTCTTCAGGATCGTTTCGTCAATTGGAAGACAAGCCATGTTCTGCCGAGGTCTCCTGCATGAAATGGTCGCCAAAAATGGATCTCCTGGCTTTGGTCTCAGCGGAGGGAGAGGTCTGGCTACACCGGCTGTCTTGGAAAAGGGTTTGGTGTGTCCCTGCGAGTGAATGCAAAGCCGTTCAAATAGCATGGAGACCGGACGGTAAGGTCCTGTGCGTGGGGCACCAAGATGGTACCATCAAGCTTTTTGACGTAGAGAACGCTGAATGCATCCAGACCTGCAACATTGGAGAGACTCCTTCCTGTATGGACTGGATTGAACAAGAGAAAACTTCGAGTCTATGCAAAGATATAGACAAACAGCCGTTCAATGTAGACAAAGCAGAGCTACTCCTCCCTACTCTCCCCTCCCTACCCAAATCTGGTGAGAGTTTATTCTCAAAGGATTCCAATGAGGAGGGGAATAAGGATCCAAAGAAACTTTCTTCCTTACCTGAAGAGTTAAGTATTCTTTGCATTGGTGACAAGAAAGGTCAAGtccatatttttctttatggCGTGTTCCTGTGTGGGGTGGTGAACATGACAAATACTTTCGAAGACTCAGAAATCCTAAATGTGtcattttcaactaaccttaaAGTCATAAGTGCCGTCATCAAATCTATGACCAGCAGCGACCAGCAGGTGCTATTACTAGAACTATATGGCAGCCCTCTACTAAGTTCCCGACAGCACGAACTTTCTGTTGTTTCCAAGAAGATTGGTACTATATTGACGCTGATGGAATACTTCAACAAAACAATAACATTGATGTCAGAAGCATGGGAGGATATACTCCTAGAAATGGACACAAAGTTAACGACCTTTGCATCTGAAAGACTTTCTGCCGGTTCTTCTGTCAGTGAGGAATTTTTGACACTTCTTACGAGGGGGACCGCATCCCCTGAGTTACAAGCATTCCTTCTTCATGAATTAACTGAAAAAGGGCTTAAAAAGTTGGGTCATAATATCGAGAATTCATATTCTAGCATTCAAGGTTTGGCACTAAAGCATTTGCAGTGCGTAACACAGGCACTGTTGTTTCACTTGACAGAGATGAATGGAATGGCAAAATGGTATGACCATTTTGGTATCTTGGGCCTCTCCGATGAATCAATCCAGAAGACTATAAAGATGCTTGGATCTGTGATGTTAAAGACCAGAGAACTTGTTGATGTCATCGAGACAAGTTTGAAAAGTTTCAAAGCCTTCTTTCAATGGTTGTACTCTGTTATCCTAAGGCTTTCCGATGAAGCTGTCCCAAGTTACGTAAAGCAGTTTAGCCAGCAAGACATAATCATGATCGCGAACTTCCTTGAGGACCAATTAAAAGTCAACGACCAAGGCAAATTCAGTTTAGAAAGAGTAGGGCAATACTTTGAGAACAAACCACTGACTGATATCTCGTCATACGGAGATACTCCGTGGACACGGTTTGTAGCAAGTAACCCAGTGTTGATTAGGAGTCCATTGATCATCACTCATAACAAGAATGTCTCTCTTACGACCTTGGCAAAACAGCTACAAGAGAGCATAGAGAGTGCCTTCGAAAAGTTGGCTGATACAATAGGTAATTCATTTCAGTGTCAATCATCTACTCACTTGGCAGACTGCGACAGCAGTTCATCAGTTACAGTCTCTCAGTCCACATCAAAGGCTACAGGGGCTCAGAATCTAGTGTTTGGGGCTGGTAAACACGAGCTGAAGAAAGTCTTCCTCGTCTGTTTGACATCAGATCAAAACAATGAAGGCCCTGTGACTGGAAAAGCATCTACGGTCTTTGTCTCTCAGATACCAACAGAAGAAGATGATATCTCTTACGAAATACTAGATGCGATGTTCTACGACTCGGAAACACTAACGGTGCTGCTCAAAGAGAAAGGAAGTGACAAAACAGGAGAAAAAGTAACAGTTTTAGCACAAGTTCCACTTAATTTAATCCCACTGGATAGTTTCATCCCCTTTAGCAAAAAGGAATTTCATTATGGAAGCTGTCTTGCCATAAGTCCAAGTTTAGCTGTCCACGACATTGGTCCCAAACTAACTCATTACCGCAAGCTCTCAGGCTTTCAGTCTGGCTCAATATCTGTCAGTGGTTCAAGAAAAGTCAGTTGTGTGTTGTCGTCAACtagaaggagagttaagctatTCGATATGGATGCAGAGGATgaggaagaagatgatgaagatgaagtgAGTAAAAATGAAAGCAAAGACTTTGAAGAAACTGCAAACACGACTTTATAG

Transcript

ENSQPTT00000063605

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91W96	Anaphase-promoting complex subunit 4 OS=Mus musculus OX=10090 GN=Anapc4 PE=1 SV=1
Q9UJX5	Anaphase-promoting complex subunit 4 OS=Homo sapiens OX=9606 GN=ANAPC4 PE=1 SV=2
Q5RAQ5	Anaphase-promoting complex subunit 4 OS=Pongo abelii OX=9601 GN=ANAPC4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007568 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12894 all species →	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan
PF12896 all species →	ANAPC4	Anaphase-promoting complex, cyclosome, subunit 4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR024789 all species →	Family	Anaphase-promoting complex subunit 4	Interproscan
IPR024977 all species →	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR024790 all species →	Domain	Anaphase-promoting complex subunit 4, long domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13260 all species →	ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0031145 all species →	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0034399 all species →	Cellular Component	nuclear periphery	Interproscan
GO:0070979 all species →	Biological Process	protein K11-linked ubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03351	APC4, ANAPC4; anaphase-promoting complex subunit 4	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.