Gene detail

Detailed information of ENSQPTP00000054682.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031555917.1, meiosis-specific with OB domain-containing protein-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000065005

aagaagaagaagtacAAGATTTTTCTTATTAGTTTTTGATGGTAAAAAGTCATTTTTATACGGCTTAATATGAACGGCCTTGATGCTTTTGGTACACAGACAGCATGGCCGGACGGTACTGCTCTCACAGATGACAGAGTTGTTGTTAATGGTAGAAATTATATTCGAGACCTGACTCAGGGAATGCAGAACACTGTTTTGGTGGGCTTGGTCATAACTAAACAAGAAAAACGTTCATTTGAAGACAAGAAAAATCCTGGAACCACTAGATCCCACTTGCATTTCACATTGAGAGACACCCCCACTGATTTTATCAATGTCAGCTGTTGGGGATCTAATACTCATATTAGCAACCTAGCAAAAGCATTCAAGATTAATGATGTTGTTGAGATCAGAAATGCACAAGTTCAGGCAAAGAGAAACACAGAATCAGAAGAAAGATGGAGTCCTTGGACCCCAAGTGGATTTCAGCTTAGTGTCAATGAGTCCCATTCATCAGTCAGTCTATACAGTGGATGGGATATAAATGATTTTGATGTGGTGGCTCATGTGCCAATAAAAGCAAGCAATGATTTCTATACTTTGGGAGATATTGTAGCCAATGGTCAAAGTCTTCATGGAGAACACATCAATATCATGGCAGCAGTAAGAAATATTGGCAAGCCAAGAGacattacaacaaaaacaggcAGACAAGTGAAGAGATGCGAAATCAAACTTTTTGATGATACAGTCTCATCATTCCCATTGATAATATGGGATGCTGAGCTTGTCGAGCTTTCACAAACTTGGTTACCAAAAGATTTTAtTTTGTTCATTGCTGATGTTAAGGTGACATTTGATAACTTCAAGAAGGCAATGGTTGCAACCTGTGACTCAAAAGCTATAATTACTACCAACCCTGatacAAGAGAGGCACAGCAACTATTTAAGTATACACAGACTGTAGACATAGTGGATGATGATTTAGAAAGATCAGGAGATGATGTTTTTGAAATCTCTAATATTCAAGACATCTTTACCGTCAGCCAAGTACTGGAAAAACTTTTGACGGCTGATGAAGAATGTGTCCCACAGGAAGTTACTGGCATTATTTATGCATTTGTTACTGAACTTGATTTGGATAATGAAAGTCAACGCTTCATTGCCACCAGATGTGGCTCTTGTGGACAGAAACTAGATGGTCCATCAGAAGTATGCATAAACCCAAACTGCTCCGCATCTAACAATGGCGATGCACAAATTAAAACTGACTTTGAAATCAGCAGTTCTTTTTCTGACCACACAGGAACGGTGCATTGCCGTATGAAGGGCAAATGCGTGGAGTCTTTGCTTGGTTGCACGGCAACTGAATTCTTAAATTTTACACAAACCCAAGCTACAGACGTCAAGTTTAAATTCCTTTTAGAAAGATGCAAGGTGTACTTCAAGATCGTCACCTCCGGGAAACGGTGGCTGCGAGTGCTATCGTGTTCTCTGGCTGACCACCAAGAAACTGCAAatgttttgcaaaatttcCTTCGTGGGTAACCGGCCTAACTGATCCTCTTCTGGTGTTTAATGGTAGCGATCATTGCTGCGCTGTTTGTAGAAGCATGTCTTTAATACGCCTTTTGGTATGATTTATTATGGTTCCCAGTAAAGATTCAAAAGCTACTCAGTGGCGCTTCGTCttaaatatttaaagaaatttcCACAGAGACTAGCTTTTTTGACTATGCAGTCAATGCAaagtaatatttttatttaacgaTGTCATTTTTCAAATGCCAACAGCTAGAGATGGTTCGAAGCACTCGAAAAATGTAAAACAATATCTGTTTCTCAAGTATGTATTGTAAAATCGAAGTATGATAGTATTTCTTCTTAATGACAATATTTTTAGATCTGTCTATTAATTTCTTAACGGGATTTTTGAATttacattttccatttttacgTTATAACCATGTAAGGTAATAATGCTACgatgttttcaaaaatgtgaaaacgtttgttttgatatttgaaCCAGTCAGACAGAACTTTGGTTTTACATTCTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4R8G6	Meiosis-specific with OB domain-containing protein OS=Macaca fascicularis OX=9541 GN=MEIOB PE=2 SV=1
Q9D513	Meiosis-specific with OB domain-containing protein OS=Mus musculus OX=10090 GN=Meiob PE=1 SV=3
B0BMX9	Meiosis-specific with OB domain-containing protein OS=Rattus norvegicus OX=10116 GN=Meiob PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006517 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSQPTP00000054682.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR052469 all species →	Family	Meiosis-specific OB domain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21166 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000712 all species →	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0008310 all species →	Molecular Function	single-stranded DNA 3'-5' DNA exonuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22420	MEIOB; meiosis-specific with OB domain-containing protein	EC:3.1.-.-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.