Gene detail

Detailed information of ENSQPTP00000054960.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031554154.1, radical S-adenosyl methionine domain-containing protein 1, mitochondrial-like isoform X2 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A4IGH2	Radical S-adenosyl methionine domain-containing protein 1, mitochondrial OS=Danio rerio OX=7955 GN=rsad1 PE=2 SV=1
Q9HA92	Radical S-adenosyl methionine domain-containing protein 1, mitochondrial OS=Homo sapiens OX=9606 GN=RSAD1 PE=1 SV=2
Q5SUV1	Radical S-adenosyl methionine domain-containing protein 1, mitochondrial OS=Mus musculus OX=10090 GN=Rsad1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004534 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055 all species →	Radical_SAM	Radical SAM superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR034505 all species →	Family	Anaerobic coproporphyrinogen-III oxidase	Interproscan
IPR006638 all species →	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13932 all species →	COPROPORPHYRINIGEN III OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006779 all species →	Biological Process	porphyrin-containing compound biosynthetic process	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15045	RSAD2; radical S-adenosyl methionine domain-containing protein 2	-	Influenza A	ko05164	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.