Gene detail

Detailed information of ENSQPTP00000055590.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031564012.1, uncharacterized protein LOC116299492 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q1M0P5	Cystathionine gamma-synthase OS=Helicobacter pylori OX=210 GN=metB PE=1 SV=1
P56069	Cystathionine gamma-synthase OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=metB PE=1 SV=1
P0A4K2	Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=metC PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001289 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01053 all species →	Cys_Met_Meta_PP	Cys/Met metabolism PLP-dependent enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000277 all species →	Family	Cys/Met metabolism, pyridoxal phosphate-dependent enzyme	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11808 all species →	TRANS-SULFURATION ENZYME FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016846 all species →	Molecular Function	carbon-sulfur lyase activity	Interproscan
GO:0019346 all species →	Biological Process	transsulfuration	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01761	E4.4.1.11; methionine-gamma-lyase	EC:4.4.1.11	Selenocompound metabolism	ko00450	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.